LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso19g0099	ATGGATCTTGAGTCTGTGATCCACAGGAACACAATTAAGGAAGAATCATGGAAGACGGTGTTGACTTTGGCCTATCAAAGCTTGGGGGTAGTGTATGGAGACTTGAGCACTTCCCCACTTTACGTTTACAAAAGCGCTTTTGCTGAGGATATTCAGCATTCAGACACCAATGAAGAAATCTATGGAGTGTTGTCTTTTGTGTTCTGGACACTCACACTGATTCCACTGCTCAAGTATGTGTTCATTGTGCTGAGAGCTGATGACAATGGTGAAGGAGGCACCTTTGCACTCTACTCATTGCTGTGTCGCCACGCCCGGGTTAGCTTGCTGCCAAACACTCAGCTTGCAGATGAGGACTTAACTGAGTACACCATGGATAATGGAACTGTTCCTGTTGATAAGAAAAATGTTGGGTTGGGGCTGAAGAACTTGTTGGAGAAACACAGGGTGCTGCAAAGGGTGCTACTTGTTCTTGCCTTGATAGGGACTTGCATGGTTATTGGGGATGGTGTGCTCACACCAGCAATATCTGTTTTTTCTGCTGTGTCAGGATTGGAGCTTTCCATGTCTAAAGAACAGCACAGATATGTGGAGGTTCCAGTGGCTTGTGTAATACTGATATTTTTGTTTGCCCTTCAACATTATGGTACTCATCGTGTGGGGAGTCTCTTTGCACCTGTTGTCTTGACCTGGCTGCTATGTATCAGTGCTATTGGTGTCTATAATATCTTCCATTGGAATCCACATGTTTATGAAGCTCTCTCCCCATATTACATGTTCAAATTTCTGAAGAAGACACAAAAGGGAGGATGGATGTCCTTGGGTGGAATTCTACTGTGTATAACAGGTTCAGAAGCCATGTATGCTGATTTAGGACACTTTTCACAATTGTCAATTAAGATTGCATTCACCTTTTTGGTATACCCTTCTTTAATCCTAGCATATATGGGACAAGCTGCATATCTTTCCAGACATCATTCCCTTGAAAGTGACTATAGAATTGGGTTCTATGTATCTGTACCTGTAAAACTTAGATGGCCTGTTCTTGCAATAGCCATACTTCAAGCTGTGGTTGGAAGTCAAGCTGTCATCACAGGGACTTTCTCCATAATCAAACAATGTTCTGCTATGGGATGTTTCCCCAAAGTTAAAATAATTCACACATCATCCAAAATGCATGGCCAGATTTACATTCCTGAGATCAACTGGAGTTTGATGCTGCTTTGCCTGGCTATTACAGTTGGGTTTAGAGATACTAAACGCATGGGAAATGCAGCAGGCTTGGCTGTCATAACTGTCATGCTGGTGACCACTTGCTTAATGTCTCTAGTTATAGTCTTGTGCTGGCACAAGAACATACTGCTAGCAGTTTGCTTCATATTGTTCTTTGGTTCCATTGAAGCACTCTATTTCTCAGCATCCCTCATCAAGTTCCTTGAGGGGGCTTGGGTTCCCATTGCCCTCTCCCTCATATTTCTCATTTCCATGTATGTGTGGCACTATGGCACATTAAAGAAGTATGAGTTTGATGTTCAAAACAAGGTTCCAATCAACTGGCTCCTCAGTTTAGGCCCCTCTCTAGGCATTGTCAGGGTCAAGGGAATTGGTCTCATACACACTGAGCTTGTATCTGGGATCCCAGCTATTTTCTCCCACTTTGTTACCAATCTACCTGCCTTCCACCAAGTTGTTATCTTCCTCTGCATTAAATCAGTCCAAGTGCCACATGTTAGACCTGAAGAAAGGTTCTTGGTGGGTAGAGTTGGCCCAAAGGAGTATAGACTTTACCGGTGCATAGCGCGGTATGGCTACCGCGACATTCACAAGGATGACATTGAGTTTGAGAGGGATCTTATTTGCAGCATAGCTGAATTCATCAGATCAGATGCATCTGAATATGGCTTAGGATTTGGGAGCTTTGAAGAAGATACAAAGATGACAGTTGTGGGGACTTCAGCATCAAACTTAGAGGGTTCAATAAGGATGACTGAAGATGATGATCAACAAGATTCTCAAATGGAAGAAGGTCCTTCAGAGTTGATGGAGGTTAAGTCTTCTCCTGAGAAAGTGAGGAAGAGAGTGAGGTTTGTTGTGCCAGACAGTCCACAGATTGATTTGGATGCAAGAGAGGAGTTGCTTGAGCTAATGGATGCAAAAGAGGCTGGAATGGCATTCATATTGAGTCACTCATATGTTAGAGCAAAAAGTGGATCAAGCTGGTTGAAAAAAGTTGTTATCAATTATGGATATGATTTCTTAAGGAGAAACTCGAGAGGACCAGCATATGCATTGAGTATACCTCATGCATCTACCTTAGAGGTGGGAATGATCTATCATGTATGA	2343	0.4285	MDLESVIHRNTIKEESWKTVLTLAYQSLGVVYGDLSTSPLYVYKSAFAEDIQHSDTNEEIYGVLSFVFWTLTLIPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVSLLPNTQLADEDLTEYTMDNGTVPVDKKNVGLGLKNLLEKHRVLQRVLLVLALIGTCMVIGDGVLTPAISVFSAVSGLELSMSKEQHRYVEVPVACVILIFLFALQHYGTHRVGSLFAPVVLTWLLCISAIGVYNIFHWNPHVYEALSPYYMFKFLKKTQKGGWMSLGGILLCITGSEAMYADLGHFSQLSIKIAFTFLVYPSLILAYMGQAAYLSRHHSLESDYRIGFYVSVPVKLRWPVLAIAILQAVVGSQAVITGTFSIIKQCSAMGCFPKVKIIHTSSKMHGQIYIPEINWSLMLLCLAITVGFRDTKRMGNAAGLAVITVMLVTTCLMSLVIVLCWHKNILLAVCFILFFGSIEALYFSASLIKFLEGAWVPIALSLIFLISMYVWHYGTLKKYEFDVQNKVPINWLLSLGPSLGIVRVKGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVIFLCIKSVQVPHVRPEERFLVGRVGPKEYRLYRCIARYGYRDIHKDDIEFERDLICSIAEFIRSDASEYGLGFGSFEEDTKMTVVGTSASNLEGSIRMTEDDDQQDSQMEEGPSELMEVKSSPEKVRKRVRFVVPDSPQIDLDAREELLELMDAKEAGMAFILSHSYVRAKSGSSWLKKVVINYGYDFLRRNSRGPAYALSIPHASTLEVGMIYHV*	781

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso19g0099	780	TIGRFAM	kup: potassium uptake protein	23	780	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Gso19g0099	780	PANTHER	POTASSIUM TRANSPORTER 6	1	780	-	-
	Gso19g0099	780	MobiDBLite	consensus disorder prediction	661	684	-	-
	Gso19g0099	780	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	1	780	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Gso19g0099	780	Pfam	K+ potassium transporter	25	606	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso19g0099	Gso-Chr19	1071844	1079165	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso19g0099	1	780	Inorganic Solute Cotransporters	AT5G14880	77.255	0.0	1236

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso19g0099	K03549		-	gmx:100793387	1529.23

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso19g0099	19	1071844	1079165	Gso19g0099	19	1071844	1079165	ECH

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