Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0097 ATGACAAATAATCTGAATGTTGCAATAAAGCACATAATCAATGATGATGGAAATGTGAACACTTTTGTCAGAGAAATTACAAGCTTATCTCATGTCAGACACCCTAATATTGTTGCTTTGTTGAGTTACTGTGTTGAGGGAGATGAACGTTTTCTGGTTTATGAACTATGTCCCAATGGGAGCCTTTCAGAATGGCTATTTGGCAAGAACAAGGTGCTATCCTGGATACAAAGGCTAGAAATCGCAATTGATTGTGCTAGAGGTCTTTGGTTCTTACATACTTACCAAGGAGGATGCATTGTTCACCGTGATATCAAGCCAACAAATATTCTTCTGGGGTCCAAATTTGAGGCAAAGCTATCAGACTTTGGACTGTCTAAAGTTATTGAGGTGGGCGAAACGTATGTAAGCTCTGAAGTGAGAGGAACATTTGGATATGTTGACCCCGAGTACCAAAGTAACCACCATGTGAATTCATCAGGTGACGTTTACAGCTTTGGAATGGTACTTCTACAAATCCTCTCGGGAAAGAAGGTTATAAATTTGAAACTGAAGAAACCAATGCCACTGAACAAAGTGGCAAAAGCATTCACCAGGGATGGGAGGATAACAGGATTTGCTGACCCTAAACTTCAAGGAGAGTACTCTGAAGAAGCATTTGATTTTGCACTTAAGTTAGCACTATCATGTACAGCCCTCAACCAACAACGTCCATCCATGGAGCAGGTTGTCAAAAGACTAGAAGAGGCTCTGTTCATTTCAAAAGGGAGGAAGGCTTCTACTCCAGAAACTCCAGCTGACAATATTTCTAATCCATAA 819 0.4054 MTNNLNVAIKHIINDDGNVNTFVREITSLSHVRHPNIVALLSYCVEGDERFLVYELCPNGSLSEWLFGKNKVLSWIQRLEIAIDCARGLWFLHTYQGGCIVHRDIKPTNILLGSKFEAKLSDFGLSKVIEVGETYVSSEVRGTFGYVDPEYQSNHHVNSSGDVYSFGMVLLQILSGKKVINLKLKKPMPLNKVAKAFTRDGRITGFADPKLQGEYSEEAFDFALKLALSCTALNQQRPSMEQVVKRLEEALFISKGRKASTPETPADNISNP* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0097 272 PIRSF ILK 4 259 - -
Gso19g0097 272 Pfam Protein kinase domain 3 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g0097 272 Coils Coil 230 250 - -
Gso19g0097 272 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 2 258 - -
Gso19g0097 272 ProSiteProfiles Protein kinase domain profile. 1 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g0097 272 SMART serkin_6 3 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g0097 272 Gene3D Transferase(Phosphotransferase) domain 1 61 261 - -
Gso19g0097 272 ProSitePatterns Serine/Threonine protein kinases active-site signature. 100 112 IPR008271 GO:0004672|GO:0006468
Gso19g0097 272 Gene3D Phosphorylase Kinase; domain 1 1 60 - -
Gso19g0097 272 PANTHER OS01G0253100 PROTEIN 2 258 IPR045271 GO:0004714|GO:0006468
Gso19g0097 272 SUPERFAMILY Protein kinase-like (PK-like) 3 248 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0097 Gso-Chr19 1042569 1044101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0097 22 263 Receptor kinase-like Gene Family AT2G28970 43.902 1.03e-55 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Gso19g0097 Pkinase 1.7e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0097 - - gmx:102663798 542.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0097 19 1042569 1044101 Gso19g0097 19 1042569 1044101 ECH