Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0076 ATGGCAGAAGATGCTTCAATTATTCCAACACACACAAAAGCTTGGTACTACTCTGAACATGGTAGTCCAGGTGATGTTCTCAAATTAGATCCTAATTGGCCCTTACCCCAACAACTCAATGATGACCAAGTGCTCATCAAGGTCATCGCTGCATCCATTAATCCCGTTGATTACAAGAGGATGCACGGCGAGTTCAAGGACACTGACCCTCATCTGCCTATTGTGCCGGGTTATGATGTTGCTGGCATAGTAGTGAAAGTGGGAGGAGAAGTAAAGAAATTTAAGGTTGGAGATGAAGTATATGGTGATATCAACGAGCAAGGCTTGTCGAACCTTAAGATTCATGGCACTTTGTCAGAGTATACTATTGCAGAAGAGAGACTATTGGCTCATAAACCATCCAATCTAAGCTTCATTGAAGCTGCTAGCATTCCTTTAGCACTTGAGACTGCTAACGAAGCTAAACAAGTTTATAAGGCGTCTAAGATAGCAGCAACTGCTAGCACCGGCAAACTTGAACTTTTAAGGGAGTTGGGCGTTGACTTGCCTATTGATTACACAAAGGAGAACTTTGAAGACCTTCCAGAAAAATACGATCTAGTGTATGATGTAGTAGGGCAAGGTGATAGAGCATTTAAGGCCGTTAAGGAAGATGGGAAAGTTGTGACAATAGTACCACCTGGACATCCACCAGCTATGTTTTTTGTGCTCACCTCAAAGGGATCTATCTTAGAGAATTTAAGACCTTACTTTGAGAGTGGTAAGTTGAAGCCTATACTCGATGCCAAGACTCCAGTGCCATTTTCTCAGGTTATTGAAGCCATTTCCTACTTAGAAACTTCAAGAGCCACAGGAAAAGTGGTCGTTTATCCCATACCCTAA 882 0.424 MAEDASIIPTHTKAWYYSEHGSPGDVLKLDPNWPLPQQLNDDQVLIKVIAASINPVDYKRMHGEFKDTDPHLPIVPGYDVAGIVVKVGGEVKKFKVGDEVYGDINEQGLSNLKIHGTLSEYTIAEERLLAHKPSNLSFIEAASIPLALETANEAKQVYKASKIAATASTGKLELLRELGVDLPIDYTKENFEDLPEKYDLVYDVVGQGDRAFKAVKEDGKVVTIVPPGHPPAMFFVLTSKGSILENLRPYFESGKLKPILDAKTPVPFSQVIEAISYLETSRATGKVVVYPIP* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0076 293 Pfam Alcohol dehydrogenase GroES-like domain 42 103 IPR013154 -
Gso19g0076 293 Gene3D - 239 288 - -
Gso19g0076 293 SUPERFAMILY GroES-like 9 154 IPR011032 -
Gso19g0076 293 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 2 153 IPR044626 GO:0016628
Gso19g0076 293 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 154 293 IPR044626 GO:0016628
Gso19g0076 293 Pfam Zinc-binding dehydrogenase 178 289 - -
Gso19g0076 293 Gene3D - 21 143 - -
Gso19g0076 293 SMART PKS_ER_names_mod 24 289 IPR020843 GO:0016491
Gso19g0076 293 PANTHER CYTOSOLIC ALKENAL/ONE OXIDOREDUCTASE 154 293 - -
Gso19g0076 293 PANTHER CYTOSOLIC ALKENAL/ONE OXIDOREDUCTASE 2 153 - -
Gso19g0076 293 CDD MDR_like_2 13 289 - -
Gso19g0076 293 Gene3D - 162 238 - -
Gso19g0076 293 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 136 259 IPR036291 -
Gso19g0076 293 Gene3D - 144 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0076 Gso-Chr19 842019 844478 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0076 29 100 Monolignol Biosynthesis Gene Families AT1G72680 34.667 2.68e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0076 K18980 - gmx:100788619 548.125