Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0067 ATGCCTGAAGGGAGCAAAAGGAGGATACGTTTCAGCAAATTGTACAGTTTTTCTTGTTTGAAATATCCATTCAGAGATGGTCATTCCCAAATTGGGCAGAAGGGGTACTCAAGGGTTGTCCACTGCAATGATCCAGATAACCCTGAAGCAGTTCAGTTGAATTATGGAGGAAATTATGTTTCAACAACCAAGTATACAGCTTTTAATTTCATCCCCAAGTCTTTGTTTGAGCAGTTCAGGAGGGTTGCAAATATCTACTTTCTTGTTGTTGCGTGTGTTTCATTTAGTCCATTGGCACCTTTTACTGCTCTGAGTATTGTTGCTCCTTTGCTGGTTGTGATTGGAGCTACTATGGCCAAGGAAGCTGTGGAAGATTGGAGGAGGAGAAAACAGGATATAGAGGCAAACAACCGAAAGGTTCAGGTATATGGTAGAAATTATACATTTGTGGAGACTAGATGGAAGAAACTCCGTGTTGGTGATATCATTAAAGTGTATAAGGATGAATACTTTCCTGCTGATCTTCTTCTGCTTTCATCAAGCTATGATGATGGGGTTTGTTATGTCGAGACTATGAATCTTGATGGAGAAACTAATCTAAAATTAAAGCATGCCTTGGAGGTGTCAATTCATCTTCAAGATGAAAAATCTCTCCAAAAGTTTAAGGCTGTGGTTAAATGTGAGGATCCTAATGAAAATCTGTACTCATTTATTGGAACTTTACAATATGATGGTAAAGAATATCCTCTTTCCTTGCAGCAGATCCTGTTAAGAGATTCTAAGCTGAAAAACACTGATTATATCTATGGCGTTGTTATCTTTACTGGCCATGATACAAAAGTCATGCAGAACTCCACTGATCCTCCGTCCAAGAGAAGCAAAATTGAGAGAAAAATGGATAAGATAATCTACATCCTCTTCAGTACCTTGGTTTTGATATCCTTTATTGGTTCTGTCTTTTTTGGTGTTGAGACCAAAAGGGATATTAGTTCTGGCAGGTATAGAAGATGGTATCTTCGTCCAGACAACACAACGGTGTTTTATGATCCTAGAAGGGCAACACTTGCTGCTGTTCTTCATTTTTTGACTGCTCTCATGTTGTATGGATATCTAATTCCAATATCACTTTATGTGTCCATAGAACTTGTGAAAGTTCTGCAGAGTATTTTCATCAACCATGACCAGGAAATGTATTATGAAGAAACAGATAGGCCAGCTCGTGCACGTACATCTAATTTGAATGAAGAACTTGGTCAGGTTGATACAATATTGAGTGATAAAACTGGTACTTTGACATGTAACTCGATGGAGTTTGTCAAATGTTCAATAGGGGGCATTCCGTATGGCCGTGGTATGACAGAAGTGGAGAAGGCACTTGCTAGGAGAGGAAAAGATGTGGAATCTGAAGTTGATGGGGGATCATCTGATTTGTTGGGTCAGAGTAATGACTTTGTGGACTCTCGGCATCCAATTAAGGGCTTTAACTTTAGAGATGAGCGGATAATGAACGGGCAATGGGTTAATGAACCATATACAGACTTCATTCAGAGATTCTTTCGAGTTTTAGCTATTTGTCACACAGCTATTCCAGATGTAGATAAAGAGTCAAGAGAAATTTCCTATGAAGCTGAGTCACCAGATGAAGCGGCTTTTGTCATAGCTGCAAGGGAGCTTGGTTTTGAGTTTTTTGCAAGGACACAAACAAGCATATCATTGCATGAATTGAATTATGAAAGTGGAAAAAAGGTTGACAGAGTGTACCAGCTTCTGCATGTCTTAGAGTTCAGCAGTTCCCGCAAAAGAATGTCAGTGATAGTGAGGAATGAGGAAAATCAATTATTGCTCCTATGCAAGGGTGCTGACAGTGTAATGTTTGAAAGGCTCTCGCAACATGGAAGACAGTTTGAGGCTGAAACCAGGGATCATATCAAAAGATATTCTGAGGCTGGTTTAAGAACCCTTGTAATCACATACCGTGAACTTGATGAAGAAGAATATAAGTTGTGGGACAATGAATTTTCAAAGATCAAAACTACTGTAACAGAAGACCGAGATGCGCTGGTGGATGCAGCTGCTGATAAGATGGAAAGGGATTTGATTCTTCTTGGTGCTACCGCAGTTGAGGATAGACTGCAAAAGGGGGTTCCTGAATGCATTGAAAAGCTCGCCCAGGCAAAAATCAAGTTATGGGTATTAACTGGAGACAAGATGGAAACTGCGGTCAACATAGGGTATGCATGTAGTTTACTAAGACAAGACATGAAACAGATAGTGATCACTCTGGATTCACCAGATATCCTATCATTGGAAAAACAAGGGGACAAGGAAGCTCTATCAAAGGCCTCTATTGAAAGCATTAAGAAGCAAATTAGAGAAGGAATCTCGCAAATCAAGTCTGCGAAAGAGAGTTCTAATACAACTGGGTTTGGCTTGATAATTGATGGGAAGTCCTTGGATTATTCTCTTAACAAGAATTTGGAAAGGGCCTTCTTTGAGCTGGCAATTAATTGTGCTTCTGTCATATGTTGCCGATCTTCACCCAAACAAAAAGCTCGTGTTACAAAATTGGTGAAATTGGGAACAGGGAAGACAATATTATCTATCGGCGATGGGGCAAACGATGTTGGCATGCTTCAGGAGGCTGATATTGGAGTTGGCATTAGTGGTGCTGAAGGGATGCAGGCTGTAATGGCAAGTGATTTTGCAATAGCTCAATTCCGGTTTCTGGAGCGTTTGTTGTTGGTACATGGCCACTGGTGTTATCGGCGTATATCAATGATGATATGCTATTTTTTCTATAAAAACATTGCATTTGGATTTACCCTATTTTGGTTTGAGGCATATGCTTCTTTCTCTGGTCAAGCTGCTTACAATGATTGGTACATGTCATTTTACAATGTCTTCTTCACTTCACTTCCAGTAATCGCTCTAGGTGTTTTTGATCAGGATGTTTCTGCCAAACTTTGCCTAAAGCATCCCTATCTATATCTAGAGGGAGTAGAGGACATCCTCTTCAGCTGGCCCCGGATTCTTGGCTGGATGTTGAATGGAGTCCTTAGTTCTTTAGTGATCTTCTTCTTGACCACTAATTCTGTCTTGAATCAAGCCTTCCGAAGAGATGGCAAGGTGGTAGATTTTGAAATACTTGGGGTCACAATGTATACATGTGTGGTGTGGACTGTGAATTGCCAAATGGCACTTTCCATCAACTACTTCACCTGGATACAGCATTTTTTTATATGGGGCAGCATTGCATTTTGGTATGTATTTGTGTTGGTTTACGGTTACCTCTCTCCAGCCATATCCACTACAGCTTACAGGGTTTTTGTGGAAGCATGTGCTCCAAGTGGTCTATATTGGCTGGTTACCCTTTTGGTTGTTGTGTGTGTGCTTCTACCCTATTTCTCCTATAGGTCTTTCCAAAGTCGGTTTCTACCAATGTACCATGATATTATACAGAGAAAACAAGTAGAAGGGCATGAAGTTGGCTTATCTGATGATGAGTTACCTAAACAAGTCCAGGACAAACTACTACATCTGAGAGAAAGATTGAAGCAAAGGGAGTTGTGA 3570 0.4028 MPEGSKRRIRFSKLYSFSCLKYPFRDGHSQIGQKGYSRVVHCNDPDNPEAVQLNYGGNYVSTTKYTAFNFIPKSLFEQFRRVANIYFLVVACVSFSPLAPFTALSIVAPLLVVIGATMAKEAVEDWRRRKQDIEANNRKVQVYGRNYTFVETRWKKLRVGDIIKVYKDEYFPADLLLLSSSYDDGVCYVETMNLDGETNLKLKHALEVSIHLQDEKSLQKFKAVVKCEDPNENLYSFIGTLQYDGKEYPLSLQQILLRDSKLKNTDYIYGVVIFTGHDTKVMQNSTDPPSKRSKIERKMDKIIYILFSTLVLISFIGSVFFGVETKRDISSGRYRRWYLRPDNTTVFYDPRRATLAAVLHFLTALMLYGYLIPISLYVSIELVKVLQSIFINHDQEMYYEETDRPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSIGGIPYGRGMTEVEKALARRGKDVESEVDGGSSDLLGQSNDFVDSRHPIKGFNFRDERIMNGQWVNEPYTDFIQRFFRVLAICHTAIPDVDKESREISYEAESPDEAAFVIAARELGFEFFARTQTSISLHELNYESGKKVDRVYQLLHVLEFSSSRKRMSVIVRNEENQLLLLCKGADSVMFERLSQHGRQFEAETRDHIKRYSEAGLRTLVITYRELDEEEYKLWDNEFSKIKTTVTEDRDALVDAAADKMERDLILLGATAVEDRLQKGVPECIEKLAQAKIKLWVLTGDKMETAVNIGYACSLLRQDMKQIVITLDSPDILSLEKQGDKEALSKASIESIKKQIREGISQIKSAKESSNTTGFGLIIDGKSLDYSLNKNLERAFFELAINCASVICCRSSPKQKARVTKLVKLGTGKTILSIGDGANDVGMLQEADIGVGISGAEGMQAVMASDFAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNIAFGFTLFWFEAYASFSGQAAYNDWYMSFYNVFFTSLPVIALGVFDQDVSAKLCLKHPYLYLEGVEDILFSWPRILGWMLNGVLSSLVIFFLTTNSVLNQAFRRDGKVVDFEILGVTMYTCVVWTVNCQMALSINYFTWIQHFFIWGSIAFWYVFVLVYGYLSPAISTTAYRVFVEACAPSGLYWLVTLLVVVCVLLPYFSYRSFQSRFLPMYHDIIQRKQVEGHEVGLSDDELPKQVQDKLLHLRERLKQREL* 1190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0067 1189 Pfam Phospholipid-translocating P-type ATPase C-terminal 896 1146 IPR032630 -
Gso19g0067 1189 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Gso19g0067 1189 PRINTS P-type cation-transporting ATPase superfamily signature 868 887 - -
Gso19g0067 1189 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 4 1161 - -
Gso19g0067 1189 SUPERFAMILY HAD-like 419 923 IPR036412 -
Gso19g0067 1189 Gene3D - 548 701 IPR023299 GO:0000166
Gso19g0067 1189 CDD P-type_ATPase_APLT_Dnf-like 57 1028 - -
Gso19g0067 1189 SFLD Haloacid Dehalogenase 408 919 - -
Gso19g0067 1189 Pfam Phospholipid-translocating ATPase N-terminal 40 103 IPR032631 -
Gso19g0067 1189 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Gso19g0067 1189 SUPERFAMILY Calcium ATPase, transduction domain A 143 284 IPR008250 -
Gso19g0067 1189 Gene3D - 702 908 IPR023214 -
Gso19g0067 1189 Pfam E1-E2 ATPase 136 328 - -
Gso19g0067 1189 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 431 669 IPR023299 GO:0000166
Gso19g0067 1189 Pfam Cation transport ATPase (P-type) 542 630 - -
Gso19g0067 1189 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 1154 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Gso19g0067 1189 Coils Coil 116 136 - -
Gso19g0067 1189 Gene3D - 111 287 - -
Gso19g0067 1189 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 836 951 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gso19g0067 1189 SFLD p-type atpase 408 919 IPR044492 -
Gso19g0067 1189 SUPERFAMILY Calcium ATPase, transmembrane domain M 49 1145 IPR023298 -
Gso19g0067 1189 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED 4 1161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0067 Gso-Chr19 757503 768184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0067 9 1160 Primary Pumps ATPases AT1G68710 64.631 0.0 1612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0067 K01530 - gmx:100779714 2349.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0067 19 757503 768184 Gso19g0067 19 757503 768184 ECH
Gso5g0061 5 630328 640815 Gso19g0067 19 757503 768184 GST