Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0066 ATGGAGCATGTTTTGGAGAAAAGATTTCCTCTTAATTCAGAAGATTACAAGTTATATGAAGAAGTTGGTGAAGGCGTTAGTGCCTCCGTATACAGGGCTCTCTGTGTTCCACTCAATGAGATAGTTGCCATCAAGGTTCTCGATCTAGAGAAGTGCAATAATGATTTGGATGGCATTCGAAGAGAGGTGCAGACCATGAACTTGATTGATCATCCGAATGTTTTACGGGCACATTGTTCTTTTACTGCTGGACACAATCTATGGGTTGTGATGCCATACATGGCAGGGGGGTCTTGCCTTCATATAATGAAATCTAACTATCCTGAGGGTTTTGAAGAGCCTGTTATTGCTACTTTATTGCATGAAGTTCTCAAAGCTCTTGTCTATCTTCATGCTCATGGTCACATACATAGAGATGTAAAGTCTGGGAATATTCTGCTTGATTCTAATGGTGCGGTTAAACTAGCTGACTTTGGAGTGTCAGCATGTATGTTTGATGCTGGAGATAGGCAACGTTCAAGAAACACTTTTGTTGGAACACCTTGCTGGATGGCTCCTGAAGTTATGCAGCAATTACATGGATATGATTTTAAAGCAGATATATGGTCATTTGGTATAACGGCACTTGAACTTGCTCATGGTCATGCCCCATTTTCCAAGTATCCACCTATGAAAGTTTTGCTTATGACTTTACAAAATGCCCCTCCTGGTCTTGATTATGAAAGAGACAAGAGATTTTCAAAGGCTTTCAAAGAGTTGGTTGCCACCTGCTTAGTAAAAGATCCAAAAAAGCGTCCAAGTTCAGAAAAGCTTTTAAAACACCACTTCTTTAAACAAGCACGTGCCAGCAAATATCTAGCTCGCACCATTTTAGAAGGCCTTGCTCCTTTAGGAGATCGTTTTAGATTGCTGAAGGCTAAACAGGCAGATTTATTGGTGCAGAACAAGGCTCTTTACGAGGATAAGGATCAATTATCTCAGAAAGAATATATTCGAGGAATTAGTGCCTGGAATTTTAACCTGGAGGATTTGAAAAGTCAAGCTGCTCTTATTCAAGATGATGACATACCTAATGCAGAAGAGTCACAAAGGGATAAGAAGCAAAAAGACAGATTGGACGACTTCAAAGTTTCTGCAGAGAGGCTATCACCTGGAGCAGCTAATCATTCAGATGATGCACCAACGCAGGACAAGGAGGATGGATTCAACAATCTTCCGGATTTGGAGAGCTCACTTGCTTCATTTCCTAGTAAACCTCTTCAAGCACTTAAAGGATGCTTTGATATGTGTGAGGATGACGTCAACAACAGCAGTCCAAGAAATTTGGATCATGATGGAAGAATTGACAATGAAAGTTCTGGGACAAGTACTTCATTACAACAAAATGCTACCAGTCATCAAAAAAAGTTTCCAAGTGGTTCTTTACTACCTGATAATTTTCTTTTTCCCAAAAAGATTGTTACTGATGGGGACAGGGATTATCTACAAACAAAGTATTCTTCAGACAGGAATCACAGTGGTCCGTTGCAATATCGGCAGAAGAGAGACACCAACAACCTTCCATTGGTTGATGACACATCGGATGGAGCATTTGTCCAGTTTAGGGGGCGGTTTAAGGTCACGCCGGCAGATCTCAGTCCAATGGGTCCTTCAAACAGCACATCTGGCCCACTTGTTAGTCCTACCAGTCCACCAAATCCAAATTTCCTGTCTGTAGCTATTCTTCCATCACTGCAGTGCATCTTGCAACAGAACGGTTTGCAGAGGGAAGAGATTATTAAATTAATAAAATATGCAGAGCAATCTTCTGGCAAGAATACAGAATCAATGGAGGCAGGGATAGTTGATATTTTGCAGGCACCACCTGCAACAACTAGGGAGCGAGAGCTGCATTTTCAGGTGATTCAACTCCAGCAGAGCAATGGAATCCTTTTTGAGGAATTGCAAAAACAAAAGATGAAAAATGTTCAGTTGGAAAAACAGTTGAGCAGTATGATTAACAAAGTGGAAAAGTGA 2016 0.4092 MEHVLEKRFPLNSEDYKLYEEVGEGVSASVYRALCVPLNEIVAIKVLDLEKCNNDLDGIRREVQTMNLIDHPNVLRAHCSFTAGHNLWVVMPYMAGGSCLHIMKSNYPEGFEEPVIATLLHEVLKALVYLHAHGHIHRDVKSGNILLDSNGAVKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKAFKELVATCLVKDPKKRPSSEKLLKHHFFKQARASKYLARTILEGLAPLGDRFRLLKAKQADLLVQNKALYEDKDQLSQKEYIRGISAWNFNLEDLKSQAALIQDDDIPNAEESQRDKKQKDRLDDFKVSAERLSPGAANHSDDAPTQDKEDGFNNLPDLESSLASFPSKPLQALKGCFDMCEDDVNNSSPRNLDHDGRIDNESSGTSTSLQQNATSHQKKFPSGSLLPDNFLFPKKIVTDGDRDYLQTKYSSDRNHSGPLQYRQKRDTNNLPLVDDTSDGAFVQFRGRFKVTPADLSPMGPSNSTSGPLVSPTSPPNPNFLSVAILPSLQCILQQNGLQREEIIKLIKYAEQSSGKNTESMEAGIVDILQAPPATTRERELHFQVIQLQQSNGILFEELQKQKMKNVQLEKQLSSMINKVEK* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0066 671 MobiDBLite consensus disorder prediction 542 563 - -
Gso19g0066 671 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g0066 671 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Gso19g0066 671 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 668 - -
Gso19g0066 671 MobiDBLite consensus disorder prediction 357 378 - -
Gso19g0066 671 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g0066 671 MobiDBLite consensus disorder prediction 497 526 - -
Gso19g0066 671 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 668 - -
Gso19g0066 671 MobiDBLite consensus disorder prediction 500 524 - -
Gso19g0066 671 Gene3D Phosphorylase Kinase; domain 1 5 92 - -
Gso19g0066 671 CDD STKc_OSR1_SPAK 14 277 - -
Gso19g0066 671 MobiDBLite consensus disorder prediction 352 410 - -
Gso19g0066 671 Coils Coil 648 668 - -
Gso19g0066 671 MobiDBLite consensus disorder prediction 546 563 - -
Gso19g0066 671 SUPERFAMILY Protein kinase-like (PK-like) 14 278 IPR011009 -
Gso19g0066 671 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g0066 671 MobiDBLite consensus disorder prediction 437 474 - -
Gso19g0066 671 MobiDBLite consensus disorder prediction 451 472 - -
Gso19g0066 671 Gene3D Transferase(Phosphotransferase) domain 1 97 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0066 Gso-Chr19 729984 741109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0066 1 668 MAP Kinase Kinase Kinase Kinase AT5G14720 66.230 0.0 918
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Gso19g0066 Pkinase 2e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0066 K08835 - gmx:100778837 1344.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0066 19 729984 741109 Gso19g0066 19 729984 741109 ECH
Gso5g0060 5 600833 613849 Gso19g0066 19 729984 741109 GST