Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0058 ATGTCTGGGTTGGAGGAATTGAGAAAAAAGCTTGCACCTTTATTTGATGCCGAGAAGGGTTTCTCATCAAGTTCAACATTGGACCCTTGTGATTCTTACACATTCTCGGATGGTGGGACTGTTAACTTGTTGAGTAGATCATATGGGGTTTACAATATCAACGAGCTTGGGTTGCAGAAGTGCACATCTAGGTCCGTGGATGAAACTGATCACAGTGAGAAAACGTATAAGTGTTGTTCCCATGAGATGAGAATATTTGGAGCAATAGGGAGTGGTGCCAGTAGTGTTGTGCAGAGAGCTATACATATACCAACACATAGGATTCTGGCATTAAAGAAGATCAACATCTTCGAGAAGGAGAAAAGGCAGCAGCTCCTTACTGAGATAAGGACATTATGCGAAGCACCATGTTATGAGGGTCTTGTAGAATTTCACGGGGCATTTTACACCCCAGACTCTGGACAGATAAGCATAGCTTTGGAGTACATGGATGGAGGATCGCTTGCAGATATTTTGCGAATGCATAGAAGAATACCTGAACCTATTCTATCTTCCATGTTTCAGAAGCTCCTGCATGGTCTAAGCTATCTCCATGGAGTCAGACATCTAGTTCACAGAGACATAAAGCCTGCCAATCTACTAGTAAATCTTAAGGGGGAGCCAAAGATTACTGATTTTGGTATTAGTGCTGGCTTAGAGAATTCAGTGGCAATGTGTGCTACATTTGTTGGAACTGTTACATACATGTCGCCTGAGAGGATTCGAAATGAAAACTATTCTTATCCAGCTGATATTTGGAGCCTTGGTCTTGCTCTTTTTGAGTGTGGGACAGGAGAATTCCCGTATACTGCAAATGAAGGTCCTGTCAATCTTATGTTGCAGATCCTGGATGATCCATCACCATCACCATTGAAAAACAAGTTTTCACCTGAATTCTGCTCCTTTGTTGATGCTTGCTTACAAAAGGATCCAGATACCAGGCCAACAGCAGAGCAGCTGCTTTCGCACCCCTTTATCACAAAGTATGAGGATACCAAGGTCGATTTGGCAGGATTTGTTCGAAGCGTTTTTGATCCTACACAAAGAATGAAGGATTTAGCAGATATGTTGACAATACATTATTACTTGCTATTTGATGGACCTGATGATTTGTGGCAACATACAAGGAATTTATATAGCGAAAGCTCAATTTTCAGTTTCTCTGGGAAACAACATCGTGGTCCAAGTAATATCTTTACATCTCTATCAAGTATTAGAACTACATTGGTTGGTGACTGGCCTCCTGAAAAGTTGGTGCATGTTGTTGAGAGGCTCCAATGCCGCGCTCACGGTGAAGATGGAGTTGCAATTAGGGTATCAGGATCCTTCATAATTGGAAATCAGTTCCTCATATGTGGAGATGGCATTCAAGTAGAGGGCTTGCCAAACTTCAAGGATCTTGGAATTGACATTCCTAGCAAAAGAATGGGTACATTTCATGAACAGTTCATTGTGGAACCAACAAGCCTTATTGGATGCGAACCAACTAGCCTTATTGGATGCGAACCAACTAGCCTTATTGGATGCTACACCATTGTCAAACAAGAGCTATACATTAACCAGTAA 1605 0.4181 MSGLEELRKKLAPLFDAEKGFSSSSTLDPCDSYTFSDGGTVNLLSRSYGVYNINELGLQKCTSRSVDETDHSEKTYKCCSHEMRIFGAIGSGASSVVQRAIHIPTHRILALKKINIFEKEKRQQLLTEIRTLCEAPCYEGLVEFHGAFYTPDSGQISIALEYMDGGSLADILRMHRRIPEPILSSMFQKLLHGLSYLHGVRHLVHRDIKPANLLVNLKGEPKITDFGISAGLENSVAMCATFVGTVTYMSPERIRNENYSYPADIWSLGLALFECGTGEFPYTANEGPVNLMLQILDDPSPSPLKNKFSPEFCSFVDACLQKDPDTRPTAEQLLSHPFITKYEDTKVDLAGFVRSVFDPTQRMKDLADMLTIHYYLLFDGPDDLWQHTRNLYSESSIFSFSGKQHRGPSNIFTSLSSIRTTLVGDWPPEKLVHVVERLQCRAHGEDGVAIRVSGSFIIGNQFLICGDGIQVEGLPNFKDLGIDIPSKRMGTFHEQFIVEPTSLIGCEPTSLIGCEPTSLIGCYTIVKQELYINQ* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0058 534 SUPERFAMILY NTF2-like 364 500 IPR032710 -
Gso19g0058 534 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 2 506 - -
Gso19g0058 534 CDD PKc_MAPKK_plant_like 84 343 - -
Gso19g0058 534 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Gso19g0058 534 SUPERFAMILY Protein kinase-like (PK-like) 85 401 IPR011009 -
Gso19g0058 534 ProSiteProfiles Protein kinase domain profile. 83 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g0058 534 Gene3D Phosphorylase Kinase; domain 1 76 158 - -
Gso19g0058 534 ProSiteProfiles Nuclear transport factor 2 domain profile. 366 532 IPR018222 -
Gso19g0058 534 Gene3D Transferase(Phosphotransferase) domain 1 159 354 - -
Gso19g0058 534 SMART serkin_6 83 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g0058 534 PANTHER - 2 506 - -
Gso19g0058 534 ProSitePatterns Protein kinases ATP-binding region signature. 89 112 IPR017441 GO:0005524
Gso19g0058 534 Gene3D - 358 502 - -
Gso19g0058 534 Pfam Protein kinase domain 87 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0058 Gso-Chr19 614310 619146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0058 30 534 MAP Kinase Kinase Gene Family AT5G40440 76.436 0.0 813
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Gso19g0058 Pkinase 7.3e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0058 K20607 - gmx:100820176 1062.75