Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0045 ATGGCCTCTTCTAGCTACTCCAATTCTCCATGTGCAGCCTGCAAGTTTTTGAGAAGGAAGTGCATGCCAGATTGCATTTTTGCCCCATATTTCCCACCAGAAGAGCCACATAAGTTTGCAAATGTTCACAAGATATTTGGTGCAAGCAACGTTAGCAAACTCCTCAACGAGGTTCAACCCCATCAAAGAGAGGATGCTGTGAACTCTCTGGCCTATGAAGCCGAAGCAAGGATCAAGGATCCAGTGTATGGTTGTGTTGGGGCCATTTCAGTGCTCCAAAAACAAGTCCTTAGGCTCCAAAAGGAACTTGATGCCACAAACGCTGATTTGATCCGCTATAGTGCTTGCAATGAAATGCCAAATCTTGGAGGGAGATCAAGGATGTGTAGTGATGATGGAGGAGGTGGTGGTTCCTCATCACTTGCTCACTCCCATGGTTTCTATTATCCTAATTGGAACAATGATCCTTGTGGAAATAATAATGGCTACCCCAGAGGGGATATATAA 507 0.4497 MASSSYSNSPCAACKFLRRKCMPDCIFAPYFPPEEPHKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQKQVLRLQKELDATNADLIRYSACNEMPNLGGRSRMCSDDGGGGGSSSLAHSHGFYYPNWNNDPCGNNNGYPRGDI* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0045 168 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 156 - -
Gso19g0045 168 Coils Coil 89 109 - -
Gso19g0045 168 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
Gso19g0045 168 PANTHER LOB DOMAIN-CONTAINING PROTEIN 25 1 156 - -
Gso19g0045 168 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0045 Gso-Chr19 454934 457001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0045 4 126 AS2 family AT3G27650 79.675 9.62e-71 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gso19g0045 LOB 1e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0045 - - gmx:100820187 312.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0038 5 358676 360585 Gso19g0045 19 454934 457001 GST