Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0032 ATGGAGTCACCTGTTAATGGAGTAGATTCCTTATCAGAGGTTCAGAATTCAGTTTCTGGGGTACATCATGATCTTCTTTCATCTGGGACTCCCCGTCCTTCACGGCCTCCCTTGAGAGCATCTAGAAACCATCAAACCAAGACCATCCACCATCAAAACAGCCATGTAATTAATCAAAAGCATTCCTATCAAGAGGGAAACAATGTGGAGCATGAAAGGTTGCCAACAAAATTGTGCAGCAAGCATCAACCACTTGATGATTCCAAGAATTGTGAGTCAAGTGATGTGTTAGAATCTGACAATTGCATCTTAGGGCCGTCAAAACGAGTTGTGGCTAATCATGCAAGGAGTTACTGCCAGTCAGAGGTTACTTTCTGTCCAAGTCCTCAGAGTAGTTTCTATTCAGCCACTGTCTATTCGGAAGCGAAACAAAGTTTCACCAACACTGAGGTCAGTGAGTGTGCTAGTGTTGACAAGTCTTGTGTAAGTGGAGAAATGGCAAATTCCTGTGATTTTAATGAGAGCAGGAAGACCAGCATCTGTAGAGCAAGTACTGGCAGTGATGCTAGTGATGAGAGCAGCACCAGTAGTTTGAGCAGTGTCGTGTATAAACCACACAAGGCCAATGACATAAGATGGGAAGCGATTCAAGCTGTCCGAGCTCGAGATGGGATGTTGGAAATGAGGCATTTCAGGTTGTTGAAGCAATTGGGGTGTGGAGACATAGGGGTAGTGTATCTAGTTGAATTGAGTGGCACAAGAACTTCTTTTGCCATGAAGATCATGGACAAGACCAAGCTGGCGAATCGCAAGAAGGTTCTGAGGTCTCAGACCGAGAGAGAGATATTGCAGTCTTTAGATCACCCTTTTCTACCCACATTGTATACACACTTTGAGACAGAGATATTTTCTTGCTTGGTAATGGAGTTCTGCCCCGGTGGGGACCTGCATGCACTCAGGCAAAGACAACCAGGGAAGTATTTTTCGGAGCATGCCGTCAGGTTTTATGTGGCAGAAGTTCTCCTTGCTTTGGAGTACTTGCACATGCTTGGGATCATCTACCGAGACCTCAAACCTGAGAATGTGTTGGTGAGAGAAGATGGTCACATAATGCTTTCAGATTTTGATCTCTCTCTAAGGTGCACTGTCAGTCCAACTCTAGTAAAGTCATCAATTAACAGCTTGGAGACAAAAAGCTCAGGATACTGCATTCAGCCTGCTTGCATTGAGCCAACTTGTGTAATGCAGCCAGACTGCATCCAACCAGCATGCTTCACGCCACGCTTTCTATCCGGAAAATCCAAGAAAGACAAAAAGTTCAAACCAAAGAATGACATGCATCACCAAGTGACCCCTCTTCCTGAGCTAATTGCTGAGCCAACAAATGCCAGATCAATGTCCTTTGTGGGGACACACGAGTACTTGGCGCCGGAGATCATCAAGGGTGAAGGGCACGGAAGTGCCGTGGACTGGTGGACATTTGGGATATTCTTGTATGAGCTTTTGTTTGGCAGAACACCATTCAAAGGTTCAGTGAATCGTGCAACACTGTTTAACGTAATTGGGCAGCCTCTACGGTTTCCAGAATCTCCTAGTGTCAGCTTTGCTGCCAGGGACTTGATCAGGGGCTTGCTTGTGAAAGAGCCTCAGCATCGTCTTGCCTATAGACGTGGTGCGACAGAGATAAAACAGCATCCATTCTTTCAGAATGTTAACTGGGCACTGATCCGTTGTGCAAATCCTCCAGAGGTGCCAAGACAGGTTATGAAGCTTGCTCAAACGGAAAAGGAGCTTGGTGTGAAGCCTTCGGGTAATTATTTAGATATTGATTTCTTTTGA 1839 0.4546 MESPVNGVDSLSEVQNSVSGVHHDLLSSGTPRPSRPPLRASRNHQTKTIHHQNSHVINQKHSYQEGNNVEHERLPTKLCSKHQPLDDSKNCESSDVLESDNCILGPSKRVVANHARSYCQSEVTFCPSPQSSFYSATVYSEAKQSFTNTEVSECASVDKSCVSGEMANSCDFNESRKTSICRASTGSDASDESSTSSLSSVVYKPHKANDIRWEAIQAVRARDGMLEMRHFRLLKQLGCGDIGVVYLVELSGTRTSFAMKIMDKTKLANRKKVLRSQTEREILQSLDHPFLPTLYTHFETEIFSCLVMEFCPGGDLHALRQRQPGKYFSEHAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCTVSPTLVKSSINSLETKSSGYCIQPACIEPTCVMQPDCIQPACFTPRFLSGKSKKDKKFKPKNDMHHQVTPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSVNRATLFNVIGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQNVNWALIRCANPPEVPRQVMKLAQTEKELGVKPSGNYLDIDFF* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0032 612 Gene3D Transferase(Phosphotransferase) domain 1 462 586 - -
Gso19g0032 612 ProSiteProfiles Protein kinase domain profile. 231 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g0032 612 MobiDBLite consensus disorder prediction 21 54 - -
Gso19g0032 612 PANTHER FLIPPASE KINASE 1-RELATED 76 612 - -
Gso19g0032 612 SUPERFAMILY Protein kinase-like (PK-like) 207 589 IPR011009 -
Gso19g0032 612 Gene3D Phosphorylase Kinase; domain 1 229 314 - -
Gso19g0032 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 352 364 IPR008271 GO:0004672|GO:0006468
Gso19g0032 612 Pfam Protein kinase domain 465 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g0032 612 Pfam Protein kinase domain 232 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g0032 612 Gene3D Transferase(Phosphotransferase) domain 1 315 383 - -
Gso19g0032 612 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL3 76 612 - -
Gso19g0032 612 CDD STKc_phototropin_like 229 586 - -
Gso19g0032 612 SMART serkin_6 231 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0032 Gso-Chr19 286681 290818 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0032 139 612 AGC Kinase Gene Family AT5G47750 71.341 0.0 703
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gso19g0032 Pkinase 3.8e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0032 K08286 - gmx:100810909 1204.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0032 19 286681 290818 Gso19g0032 19 286681 290818 ECH