Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0030 ATGGCCATGCTTCTGATCTATGCAGCCATAACAGCATCATTGTTCTGCTTCCTATACTTGTTTCATCGTAGAAGAAGCTGCAAACACCCTCTCATGAGGGACTACCCCATCCTTGGCATGTTACCACCAATCCTCTTCAACTTGTGGCGAATCCATGATTTTTGCACCGAGGTACTGAAAAAACAAGGTGGCACTGGGGAATTCAAAGGGCCATGGTTCACCAAAATGCACTATTTGATCACTTGTGACTCCCTCAACGTGCAACACATGCTCTGCAAGAGCTTTGACAACTACATCAAGGGACCCGAGTTTCGCGAGATTTTCGAACCCTTCGGAGATGGGGTTGTCACTGCCGATTCAGAGACATGGAAGTACTTCAGAACCGTCCTCCATTCCTTGATCAAACAAAGAAGGTTCGAAACGTTCGTCGATAAAACCGTTCAGAAGAAGGTGCACACAAGCCTTCTTCCGATATTGGATCATGTACAACAGCAAGGGGAGATGGTGGATCTTCAAGATGTCTTCAACCGGTTCACGTTTGATAACATATGCTCCACAATCGTAGGACATGATCCTAAGTGTCTTTCCATTGATTTCCCGGAAGTTGCAATCGAGAGGGCTTTCAATGAGTCCGAAGAGTCGATATTCTACAGACACACGGTGCCAAGCAGTGTGTGGAAGTTTCAGAAATGGCTCCAAATTGGACAAGAGAAGAAGATGACAGAAGCATGCAAAACCTTTGATGAATTCATATACTCATGCATAGCGTCCAAGCGACAAGAGTTAAGCAAGTGCAGTAGAGAAGAAATGGATAATGAAGCTCCCTTTGACTTGCTTACAGCTTTGATTACTGAAGAGAGAGGGCGTGTGCATGATGACAAGTTTCTAAGGGATGCTGCGTTTAACTTTTTTGTGGCGGGGAGAGAAACCATGACTTCAGCTCTCACGTGGTTCTTTTGGCTTGTTACTAAACACCCTTTGGTGGAAGCCAAGATTCTGGAAGAGATAAAAGATAATTTTGAGGCTAATTATGAAGGGGTTGTAGGAATTGAGGAGGTAAAAAAGCTAGTTTATCTGCATGGTGCATTGTGTGAAGCATTGAGGCTCTTTCCTCCTGTGCCTATTGAGCGGAAGCAGGCAATTAAAGATGACACACTTCCAAGTGGTCACCGTGTGAATGGAAACACAATGATATTGTTTTCTTTGTATGCAATGGGAAGGTGTGAAGAGATATGGGGGAAAGATTGCTTGGAGTTCAAGCCAGAGAGATGGATATCTGAGAGGGGAGAGGTTGTTTATGCACCAGCTTACAAATTCATTGCTTTTAATGCTGGACCCAGAATCTGCTTGGGAAAGGACTTGGCCTTTGTTCAGATGAAGATGGTGGCAGCTTCTATTTTGCGAAAGTATCGATTCCAGGTGGTGGAAGGGCATTCTCCTACTCCAAGCCACTCCATTGTTCTTCTCATGAAGAATGGTCTGAAGGCTAGGATTATGAAAAGATTATAA 1509 0.4427 MAMLLIYAAITASLFCFLYLFHRRRSCKHPLMRDYPILGMLPPILFNLWRIHDFCTEVLKKQGGTGEFKGPWFTKMHYLITCDSLNVQHMLCKSFDNYIKGPEFREIFEPFGDGVVTADSETWKYFRTVLHSLIKQRRFETFVDKTVQKKVHTSLLPILDHVQQQGEMVDLQDVFNRFTFDNICSTIVGHDPKCLSIDFPEVAIERAFNESEESIFYRHTVPSSVWKFQKWLQIGQEKKMTEACKTFDEFIYSCIASKRQELSKCSREEMDNEAPFDLLTALITEERGRVHDDKFLRDAAFNFFVAGRETMTSALTWFFWLVTKHPLVEAKILEEIKDNFEANYEGVVGIEEVKKLVYLHGALCEALRLFPPVPIERKQAIKDDTLPSGHRVNGNTMILFSLYAMGRCEEIWGKDCLEFKPERWISERGEVVYAPAYKFIAFNAGPRICLGKDLAFVQMKMVAASILRKYRFQVVEGHSPTPSHSIVLLMKNGLKARIMKRL* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0030 502 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0030 502 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0030 502 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0030 502 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0030 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Gso19g0030 502 Gene3D Cytochrome P450 19 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0030 502 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0030 502 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0030 502 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0030 502 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0030 502 PANTHER CYTOCHROME P450 7 500 - -
Gso19g0030 502 PANTHER CYTOCHROME P450 FAMILY PROTEIN 7 500 - -
Gso19g0030 502 Pfam Cytochrome P450 50 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0030 502 SUPERFAMILY Cytochrome P450 19 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0030 Gso-Chr19 266477 267985 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0030 1 501 Cytochrome P450 AT4G39500 44.008 9.79e-159 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0030 - - gmx:100780625 1035.4