Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0028 ATGGCCATGCTTGTTTATGAGGCTGTAATAGTTACAGCAGTCCTCTGCATGCTATACTTCCTACATCGGAAACGATGTTGCAGACACCCTCTCTTCCCTGACTACCCCATCATCGGCATGCTACCACCAGTTCTCTGCAATTTGTGGCGCGCCCATGATTTAATATCCGATGTATTGAAACAACATGGGGGCACTGGTGAGTTCACTGGACCTTGGTTCACCATCATGAACTGTTTGATCTCTAGTGACCCCATCAACGTGCACCACGTCATGAGCAAGAATTTCCACAACTACGTCAAGGGACCCGTCTTCCGTGACATTTTTCAAGCCTTCGGAGACGGGATTTTCACCGCTGATTCCGAGGCCTGGAAATACAACAGGGATCTCTTCCATTCTCTCTTTAAAAACAGAAGCTTCGAGTTTTTTCTGGAGAAAACCATTCAGAATAAGGTGCAGAATAGCCTCCTTCCAATGTTGGATCATATGCACCAACAAAGGAAGGTGGTGGATCTTCAAGATGTCTTCGGTCGCTTCACTTTCGATAACATATGTTCTTTAGTTCTTGGATATGACCCCAATTGCCTCTCCGTTGATATTCCTGAAGTTGCAATTGAGAAGGCTTTTAACGAAGCAGAAGAGTCCATATTCTACAGACATACAGTGCCAAAGTGTGTTTGGAAGCTGCAGAAATGGCTTCAAATTGGTCAAGAGAAGAAGATGACAGAAGCATGTAAAACACTTGATCAATTCATACATGCATGCATAGCTTCCAAGAGGGTAGAGCTAAGCAACGACAATGAAATGGGTGAAGCTCATCATGTTGACTTGATAACAGCTTTGATGAGAGAAAAACAAACACACGACGATAGATTTATACGAGACGCTGTGTTTAATCTTTTTGTGGCTGGAAGAGATACCATAACTTCAGCTCTCACGTGGTTCTTTTGGCTTGTTGCCACAAACCCCTTAGTGGAAGCCAAGATTCTTGAAGAGATCAAAGAAAAGTTAGAAACCAATGAAAAGACGCTTGGGGTTTTAAGTGTAGAGAAGGTTAAAAAGCTAGTTTATCTGCATGGTGCTATATGCGAAACATTGAGGCTCTTTCCTCCTATACCTTTTGAGCGCAAGCTAGCAATTAAAGCTGACATGCTTCCTAGTGGTCATCGTGTTAATCCAAGAACAATGATATTAATTTCTTTGTATGCGATGGGAAGACTTGAAGAAACATGGGGAAAAGATTGTTTGGAGTTCAAACCAGAGAGATGGATCTCAGAGAAAGGAGGTATTGTCTATGTGCCATCTTACAAATTCATAGCTTTTAATGCAGGACCTAGGACTTGCTTGGGCAAAGACTTGTCCTTCATTCAAATGAAGATGGTGGCAGCTGCTATTTTATACAAGTATCATGTCCAAGTGGTGGAAGATTATGTTGCTACTCCAAGCCTTTCCATTGTTCTTCTCATAAAGGATGGTTTGAAGGTAATGATAACAAAAAGAGAAATTTAA 1506 0.419 MAMLVYEAVIVTAVLCMLYFLHRKRCCRHPLFPDYPIIGMLPPVLCNLWRAHDLISDVLKQHGGTGEFTGPWFTIMNCLISSDPINVHHVMSKNFHNYVKGPVFRDIFQAFGDGIFTADSEAWKYNRDLFHSLFKNRSFEFFLEKTIQNKVQNSLLPMLDHMHQQRKVVDLQDVFGRFTFDNICSLVLGYDPNCLSVDIPEVAIEKAFNEAEESIFYRHTVPKCVWKLQKWLQIGQEKKMTEACKTLDQFIHACIASKRVELSNDNEMGEAHHVDLITALMREKQTHDDRFIRDAVFNLFVAGRDTITSALTWFFWLVATNPLVEAKILEEIKEKLETNEKTLGVLSVEKVKKLVYLHGAICETLRLFPPIPFERKLAIKADMLPSGHRVNPRTMILISLYAMGRLEETWGKDCLEFKPERWISEKGGIVYVPSYKFIAFNAGPRTCLGKDLSFIQMKMVAAAILYKYHVQVVEDYVATPSLSIVLLIKDGLKVMITKREI* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0028 501 PANTHER CYTOCHROME P450 6 499 - -
Gso19g0028 501 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0028 501 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0028 501 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0028 501 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0028 501 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0028 501 Pfam Cytochrome P450 45 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0028 501 Gene3D Cytochrome P450 21 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0028 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Gso19g0028 501 PANTHER CYTOCHROME P450 FAMILY PROTEIN 6 499 - -
Gso19g0028 501 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0028 501 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0028 501 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0028 501 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0028 501 SUPERFAMILY Cytochrome P450 33 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0028 Gso-Chr19 248787 250398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0028 10 499 Cytochrome P450 AT4G39490 46.471 1.19e-162 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0028 - - gmx:100781709 1005.36