Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0019 ATGATGTCTTCTTCCTCTAGTACTAGTAGATGGACGGTTCAGGAAAACAAAGCGTTTGAAAGAGCTCTAGCAGTTTATGACAAGGACACTCCAAACCGGTGGTGCAACATTGCAAGGGCTGTTGGTGGAAAAACTCCAGAGGAAGTGAGGAGGCACTATGATCGTCTTGTGGAGGACATTAGGCGTATTGAGTCTGGCCAAGTTCCCTTTCCAATTTACAGGAACCTCCAAGATGGGGCATGA 243 0.4691 MMSSSSSTSRWTVQENKAFERALAVYDKDTPNRWCNIARAVGGKTPEEVRRHYDRLVEDIRRIESGQVPFPIYRNLQDGA* 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0019 80 Pfam Myb-like DNA-binding domain 8 54 IPR001005 -
Gso19g0019 80 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 2 76 IPR044636 GO:0003700
Gso19g0019 80 PANTHER TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED 2 76 - -
Gso19g0019 80 ProSiteProfiles SANT domain profile. 6 61 IPR017884 -
Gso19g0019 80 CDD SANT 10 57 IPR001005 -
Gso19g0019 80 Gene3D - 1 70 - -
Gso19g0019 80 ProSiteProfiles Myb-like domain profile. 3 57 IPR001005 -
Gso19g0019 80 SUPERFAMILY Homeodomain-like 9 65 IPR009057 -
Gso19g0019 80 SMART sant 7 59 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0019 Gso-Chr19 147424 148012 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gso19g0019 Myb_DNA-binding 3.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0019 - - gmx:100784910 160.229