Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2485 ATGAAAATAGCTGTTGGGGCTGCAAAAGGATTAGAATACCTTCATGATAAAGAAAATCCTCCTGTCATCTATAGAGACTTCAAGTCATCTAACATATTACTTGATGAAGGATACCACCCAAAACTTTCTGACTTTGGTCTTGCGAAGCTTGGTCCTGTTGGTGACAAATCACATGTTTCTACCCGCGTCAAGGGAACTTATGGTTACTGTGCTCCTGAGCATTGGACAGCTGACTGTGAAGAAAGTCCACTTTTTAACGACCGAAGGAAGTTTCCAAAGTTGGCTGATCCCAGACTGCAGGGGAGGTCATTACCAGGCTCTTGCCGTGGCATCATTGTGCATTCAAGAATCAGCTGCAACGCGTCCTCTGATTGGAGATGTGGTGACAGCCCTCTCTTATCTGGCCAACCAGGCATATGA 420 0.4548 MKIAVGAAKGLEYLHDKENPPVIYRDFKSSNILLDEGYHPKLSDFGLAKLGPVGDKSHVSTRVKGTYGYCAPEHWTADCEESPLFNDRRKFPKLADPRLQGRSLPGSCRGIIVHSRISCNASSDWRCGDSPLLSGQPGI* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2485 139 SUPERFAMILY Protein kinase-like (PK-like) 2 78 IPR011009 -
Gso18g2485 139 ProSiteProfiles Protein kinase domain profile. 1 139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g2485 139 PANTHER OS07G0668900 PROTEIN 82 102 - -
Gso18g2485 139 PANTHER OS07G0668900 PROTEIN 1 74 - -
Gso18g2485 139 Pfam Protein kinase domain 3 74 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g2485 139 PANTHER OS07G0668900 PROTEIN 82 102 - -
Gso18g2485 139 PANTHER OS07G0668900 PROTEIN 1 74 - -
Gso18g2485 139 Gene3D Transferase(Phosphotransferase) domain 1 1 96 - -
Gso18g2485 139 ProSitePatterns Serine/Threonine protein kinases active-site signature. 22 34 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2485 Gso-Chr18 57607146 57607783 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2485 1 101 Glycoside Hydrolase AT3G07070 50.000 2.55e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Gso18g2485 Pkinase 1.3e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2485 K13430 - gsj:114397457 296.589