Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2480 ATGAGAGCTATAAGTCACCACCTTCTAGTTTCACTACTCGATTGGAGAATCTCTACCTCACGATCTCTTTTTTCTCTTAGAACCATCATGTCACAATCTGATCATTCCTCTGCTTTTACCACACCCAGATTAGTTCTCAAGAAGGTTTTGGCCAAATCTCAACATGAAGGGGATGGAGCTGTTGTTAGAAGAGGCATTGGAAGGAGCGAGTTGAAGAACTTGGATCCCTTCCTAATGTTGGATCACTTCTCAGTATCTCCCCCAGCAGGATTTCCGGATCATCCACACCGAGGTTTTGAAACCGTCACCTACATGCTAGAGGGAGGCATCACTCACCAAGATTTTGCTGGGCACAAGGGTACAATAAGAAAGGGTGATGTTCAGTGGATGACCGCAGGCAGGGGAATCATTCACTCTGAAATGCCCGCAGAAGCAAACAACAACAAGGGATTGCAACTATGGATCAATTTATCATCCAGGGACAAAATGATGGAGCCTAACTACCAAGAGCTTCCAAGTGAGAACATACCAAGAGCAGAAAAAGATGGGGTTGAAGTGAGAGTGATAGCAGGAGAAGCAATGGGAGTGCATTCTCCTGTGTACACACGAACACCAACCATGTACCTTGTTTTCTGCATGATGCCCGGAACTCAGTGGCATCAGAGGATTCCAGAGTCGTGGAATGCCTTTGTTTATACAATTGAAGGGGAAGGAGTATTCGGGTGTCCAAGTTCATCCCCAACAGTGGCACACCATGTCCTTGTTTTGAGTCAAGGTGATGGCCTTAGCGTATGGAATAACTCTTCCAAGCCTTTGAGGTTTGTTCTGATTGGAGGCCAACCACTGAACGAGCCAGTTGTTCAGTATGGGCCTTTTGTGATGAACACACAGTCTGAGATTGAGAAGACAATTGAAGACTATCACTATGGCAGGAATGGCTTTGAGATGAGCAAGTATTGGATGTCTCAACAGTAA 975 0.4554 MRAISHHLLVSLLDWRISTSRSLFSLRTIMSQSDHSSAFTTPRLVLKKVLAKSQHEGDGAVVRRGIGRSELKNLDPFLMLDHFSVSPPAGFPDHPHRGFETVTYMLEGGITHQDFAGHKGTIRKGDVQWMTAGRGIIHSEMPAEANNNKGLQLWINLSSRDKMMEPNYQELPSENIPRAEKDGVEVRVIAGEAMGVHSPVYTRTPTMYLVFCMMPGTQWHQRIPESWNAFVYTIEGEGVFGCPSSSPTVAHHVLVLSQGDGLSVWNNSSKPLRFVLIGGQPLNEPVVQYGPFVMNTQSEIEKTIEDYHYGRNGFEMSKYWMSQQ* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2480 324 Gene3D Jelly Rolls 177 282 IPR014710 -
Gso18g2480 324 CDD cupin_pirin_C 205 281 - -
Gso18g2480 324 PIRSF Pirin 41 321 IPR012093 -
Gso18g2480 324 PANTHER PIRIN-RELATED 35 324 IPR012093 -
Gso18g2480 324 SUPERFAMILY RmlC-like cupins 43 321 IPR011051 -
Gso18g2480 324 Pfam Pirin C-terminal cupin domain 208 313 IPR008778 -
Gso18g2480 324 CDD cupin_pirin_N 60 157 - -
Gso18g2480 324 Pfam Pirin 63 155 IPR003829 -
Gso18g2480 324 PANTHER PIRIN-LIKE PROTEIN 35 324 - -
Gso18g2480 324 Gene3D Jelly Rolls 56 308 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2480 Gso-Chr18 57537839 57539670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2480 40 318 Calmodulin-binding Proteins AT3G59220 65.125 1.18e-132 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2480 K06911 - gmx:100775597 671.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2480 18 57537839 57539670 Gso8g2987 8 47544145 47545984 GST