Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2449 ATGCATTTGTTCAAACAAACTATTTTGGTGTTTTTTCTTATCAACTTTCTCCAAATATATATTATATTAAATACTCTCATGGCGCCTTTGTCACTCGCCGAAAAAAAGAAGGTTCTTTTCATAATGGGTGCAACGGGCACAGGCAAAACAAAGTTATCCATCAACTTGGGCACTCAATTCCCTTCTGAAGTCATTAACTCTGACAAAATCCAAGTCTATAAGGGCTTGGACATCATCACAAACAAGGTACCAGAGTCTGAACGTAATGGCATTCCTCATCATCTGCTAGGCATCATCGATGATCCTGATTATGACTTCACAGTTGATGACTTTTGCAAGCATGTCCTCATTGCTCTTGATCTTATTATTGAAAATGGACACCTACCCATTATCGTGGGAGGCTCAAACACTTACCTTGCAACATTGCTTGAGGATCCCAACATCGCATTTCGTTCCAAATATGATTGTTGCTTCATTTGGGTTGATGTGTCTTTACTTGTGTTGTTTCAGTATTTAGATAAAAGGGTGGACGAAATGCTTGATAAAGGAGTTGTTGATGAGATTCGAGAAACTTTTGTGCCTGGAGCAGACTACTCTCGTGGGGTTAGAAGAGCCATCGGGGTTCCTGAGCTGGGGGAGTATTTCTTGGTTGAGAAGAAAATAGATGATGAGACTAAAAAGGAGAAGATGTTGCAAGGTGCTATTGCGAGAACTAAAGAGAACACTTGTAAATTGGCTGAGGCGCAACTCTTGAAGATACATAAGATGAACTATGAGTTTGGATGGGGAATGACCAAAATTGATTCCACACAAGTGTTTGAGGCAGTTTTAAAAGGAATGGATTATAAGCACTTATACCATGAGATTGTGTTCAAACCAAGCGTAGATATAGTGAAAAGATTTCTACATGAGACAACTTCAGGAAAGGGAAAGGCACTGCGTCAAAATGGTGAACAAGTGACGGTTGTGCTTCAAAAATCGTTGAAATTGGCTAAGGATTAG 1002 0.3962 MHLFKQTILVFFLINFLQIYIILNTLMAPLSLAEKKKVLFIMGATGTGKTKLSINLGTQFPSEVINSDKIQVYKGLDIITNKVPESERNGIPHHLLGIIDDPDYDFTVDDFCKHVLIALDLIIENGHLPIIVGGSNTYLATLLEDPNIAFRSKYDCCFIWVDVSLLVLFQYLDKRVDEMLDKGVVDEIRETFVPGADYSRGVRRAIGVPELGEYFLVEKKIDDETKKEKMLQGAIARTKENTCKLAEAQLLKIHKMNYEFGWGMTKIDSTQVFEAVLKGMDYKHLYHEIVFKPSVDIVKRFLHETTSGKGKALRQNGEQVTVVLQKSLKLAKD* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2449 333 Gene3D - 35 302 IPR027417 -
Gso18g2449 333 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 165 264 - -
Gso18g2449 333 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 32 314 IPR039657 -
Gso18g2449 333 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 194 IPR027417 -
Gso18g2449 333 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 32 314 - -
Gso18g2449 333 Pfam IPP transferase 151 250 - -
Gso18g2449 333 Pfam IPP transferase 71 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2449 Gso-Chr18 57180906 57182107 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2449 119 316 C2H2 Transcription Factor Family AT2G27760 31.004 6.30e-21 91.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2449 18 57180906 57182107 Gso8g3018 8 47841236 47842147 GST