Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2445 ATGAATCTTACATGGAAATTAATGCAAGAGTTGAAGCCTACCCTTCTCATGGTGTTGGTGCAGGTTTCGTATGCTTTTAGCAGTGTGCTTTACAAGCTCGCCATAAATGATGGAATGAGCCTTAGAGTACTCAGTGCCTACCGTCTCATTTTCGGAGCTGCTTTCTCATTTTCTCTTGCTCTTATTTTCGAAAGGAAGAAGAGGCCAAAGTTGACGTGGAGGGTGGTTTTGATGTCATTTTTTTCCGGTCTATTTGGAGGGAGTTTATTCCTAAACCTTTTCTTCTTTGCTTTGGCTTTGGTATCAACAACATATGCTTACGCTGTTTTTAATCTGGTTCCTGCAACCACTTTTATCCTCTCCATCTTGTGCGGGTACGAAAACTTAAATGCGCGAACCGCAGCAGGAAAGACTAAGGTGTTGGGAACGATGCTGGGAATTGGCGGGTCAATGCTGTTGTCATTTTTCAAAGGGATGAAAATTAATATTTGGAACTTTCACATTAAGCTTTTGCATAAAAATGACAATAGTGATCAGCTAGGAACACGAACACCACATGCAAACCCCAAAACAGAATGGCTAGGTGTTTTAAGTGGTATTGGAAGTTGCTTGAGTTTTTCAATATGGCTCATCATTCAGGCTAAGGTGAGTAAGGAATATCCAAGCCATCACTCAGCTACAGCGTTGATGGCCTTAATGGGAGCAATACAAGCCACAGCCTTTGCCCTCTGTGTTGAAAAAGATTGGAGTCAATGGAACTTGGGTTCTAGTATTAGGCTTCTCACAGCACTTTTTTCGGGAACTGTGACCTCTGGATTTGTGATTATTGCCACAACATGGTGTGTACGGAAGAGAGGTCCATTGTATGCATCTGTTTTCAACCCCCTTTCCCTTGTGCTCGTGGCTATTGCTGCTTCCATGTTATTACAAGAGCACTTATACGTAGGAAGTGTAATTGGAGCAGTGCTAATTGTGTGTGGTCTGTACATGGTGCTGTGGGGTAAGAACAAAGAAATGAAAACGGCAACTCACTTGGTGTCATTAGACAACACCAAAGAATTTGGAGTGATCACTGACGTTGTTGTCGTGTCTACGACGGAGAATAGTGATCGTGAGAACAATAGCCACGACAATTGTAAGAGCAACATTGTAACAAATTAA 1161 0.422 MNLTWKLMQELKPTLLMVLVQVSYAFSSVLYKLAINDGMSLRVLSAYRLIFGAAFSFSLALIFERKKRPKLTWRVVLMSFFSGLFGGSLFLNLFFFALALVSTTYAYAVFNLVPATTFILSILCGYENLNARTAAGKTKVLGTMLGIGGSMLLSFFKGMKINIWNFHIKLLHKNDNSDQLGTRTPHANPKTEWLGVLSGIGSCLSFSIWLIIQAKVSKEYPSHHSATALMALMGAIQATAFALCVEKDWSQWNLGSSIRLLTALFSGTVTSGFVIIATTWCVRKRGPLYASVFNPLSLVLVAIAASMLLQEHLYVGSVIGAVLIVCGLYMVLWGKNKEMKTATHLVSLDNTKEFGVITDVVVVSTTENSDRENNSHDNCKSNIVTN* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2445 386 PANTHER WAT1-RELATED PROTEIN 12 360 - -
Gso18g2445 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 157 - -
Gso18g2445 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 337 - -
Gso18g2445 386 Pfam EamA-like transporter family 194 332 IPR000620 GO:0016020|GO:0016021
Gso18g2445 386 Pfam EamA-like transporter family 13 154 IPR000620 GO:0016020|GO:0016021
Gso18g2445 386 PANTHER WAT1-RELATED PROTEIN 12 360 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2445 Gso-Chr18 57116532 57118875 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2445 11 354 Nodulin-like Gene Family AT1G25270 40.286 3.35e-85 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2445 - - gmx:100815160 733.791