Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2437 ATGAATGATTCTACTGTGAAGAATTTGGCCATCACGGAGAAGAAGGTGCAGCAGCATAAACCTGGTGGTTGTGTTGGCATTTTCTTTCAGCTCATTGATTGGAAGAGGAAACTCTCCAAGAAGAAGCTCTTCTCCAAGAAGCTTCTTCCTCCTGCTGGTGCGAAAAAGTTTAAGGGAGATGAAAAAATGCCAAATTCCAAGCTTCACTTGATTGCTAATGAGAACAGTGGAGGTTTTCCTGGTGCTAAAAAAGGTGGGAATCATGGTCTAGATGTAGAACAAAAGAGTGAAATGCGAGTTCCGAGTCTGGTAGCTAGGTTGATGGGTCTCGAATCTATTCCGGCAGCTCAGCGAGACAAGTCCAAGAAAGCCTTGTGTGCTGATGGGAAGAAGGAATCTTTGGGTGACCATTGTGAGTTGGATAGGCAAGGCGTGGATTTGGAAATGGGAGTTGTAAAGCATGATTCAAGACCTCAGAAGCTTCAGAAAACTGGGTCATATGAGAGAAGGGCGGTGACCAGGTTTGGAGCCGAGGCACTGCAAATTAAGAGTGTTTTGTCACGAGCAAGAAAATATAATCACCATCATCATCAGAAGCTTGCTTCTTTGAGAACCCCAAGAATTCCTTCCGGAAAGAGTGCTTCTCGAAGCTCTAGGTTAATAGGAGCAGCTACAAAAATTTTGGAACCTGGACTGCAAAGCAGAAGTAGAGCTAAAAATTCTCTTACATATCCTGCTTCCATGTATCCTCCCAAGACTGGCATTGTGACAAATGGTGTGGAAGATGGGTCAGCGATTATGCAAAATCAATCTTGTTTTGAAACCAGCTCATGCAAGCAATTGATGGGGCAGACCTCTTGCAAAAACTGTGGTAATTTGCTAGATGTTCTTGACTGCAAGCTTGAGGTTGGGAGACAGTCATTGGTTCCTCCACCCATTGTTTCAGATGTGATCACTGCTACCTCTATGGTATCATTAGAGAAGAAGGGAAAGTCATTCCCTCCTCATGGACATGAAAGAGATGTAGTTCTTCCGAGAAGTCAGGAAAAGCTCATATCTCTTGTTACTGAAGGAAAAGGAAAAAATAATGCACAACAATCATGGAGTGAACCCACTGCCAGAAGAATGCCAATGCCCCATGACGGTCCAGCTAAATGGAATTCATCTTGCCAACCATCAAGGGCCCTAGAGGATGATGCATCTTCTTTTGCCTTAAAACACAAAACTCAAACACAAGAACAGATGTTAAGCAGTGAAAGATATTCATCTGGGTCTACAACGAGTGATATGCAAGTAAAAAGGGTATCATCATCTATGAGTGCTGTGAATGGAACTAAAGATTTTGTTGCTATGAATAGAAGTCTAAGTGGTCGATCAAGGATAAGGTCACTTACCAAAGCGGATGGTTCCAAATTTGACCTAGAGAAAAAACCTTACAATCGACAACAGAGTTCCTTATCTCACGTAAGGACATTAGAGAGAAAAAGAAGGATTCCTAATGTCACACAACTAGAAGGTACAGGTTCTGTTTATTCAGTTGGTACAAAACAAAGAAATCTCCATTCTGGTGGAATGGGTGGCAAAATAAGGGACTTCAATGCTTCTTCCTTGAACAATTCTATTGTAAAAAATAAACAAGATGGTCAAGGAGAAAGAGTTATTAAGGTTAATGACAATAAGATCAATGATGTAGTGTCATTTACATTTAATTCCTCCTTGAAGCAAAAGATAGAAATACCTGGCAAGAGGGAAGAGACAAGCAGCGACAATGAGAGTATGGTGTATTTCCAAAGGCCTTCGCCCTTGAGAGTTGATGCTTTAGGTGCCTTTCTTGAACAAAAATTGATGGAATTGACCTCTCAAAGAGATGAGGAGTTGGCTACAGGTGCTCCACCTAAAAAATCTAGTGCCATGATTCTTCAAGAGCTGATATCTGCTCTAAGTTCCGAGCATCTGATCTGTCATGATGGTCATCACATGTTTAATGAAAATGTTTGTTTTCATTATGGAGCAAAACAAGAAAGGTTATTAGGAACCTGTTGCAATGGTAATCATCTGAGTCCTGGATCCGTTTTGGAAGCTTCTTTTTCTTCCAGTAGTCTGGATGAAAGCTCAGGGCATGGTTTTCACCCTGACCCCATGAATTACTCTTATTATGGTCAACCGGAACATGATACTGAACTTTCAGATTCTGCAACATCCTTTAACAAAGGAAGGATGGATGAGATACTGAGTGATGTTGTCAACCAAATTCCCCGGGCTTTAGAAAGTTTGCTCACTTTTGGGACAGAATTGACACGAAGCAAGCTCAACCATATGAAGGATATTCTCTTGAATTCTGAGTTGGTGCTTAGAATTGCAACTGACCGCAGAGAGGATCAAGGGCCACAACTTCTAATTTATCAGTTTCTCGTTGATGATCTTGACAGTATGGTGAGTGATGCTATGTGGACAGATGCTAATGGCATCGTGGGTTGTGAGGATTCTAAACAGAGAAAGGAGCTAAAGGGGTTTCTTCTTGATTGTGTTATAGAATATCTAGAATCAAATTGCTGCCAATATTTTAACTCTGGATTCAAGAAATGGACGAAGCTGCCCTTGTGCATGGAAGCTGAGATGTTGGCTCAAGAGGTGAAGAGGGAGATCAACAAGTGGTTATCTATGGTTGGGATGGTGCCTGATGAAATAATAGAATGGGAAATGAGCCACTCCTTGGGGAAATGGACTGACTTTGACATTGAAGCATTTGAGGCTGGTGTTGATATAGATGGGGATATACTTCAAATTTTGGTTGATGAAGTTGTTCAAGACCTGCAGGTTGCAAGCAGGGGCACCATTTACTTCTAA 2847 0.4159 MNDSTVKNLAITEKKVQQHKPGGCVGIFFQLIDWKRKLSKKKLFSKKLLPPAGAKKFKGDEKMPNSKLHLIANENSGGFPGAKKGGNHGLDVEQKSEMRVPSLVARLMGLESIPAAQRDKSKKALCADGKKESLGDHCELDRQGVDLEMGVVKHDSRPQKLQKTGSYERRAVTRFGAEALQIKSVLSRARKYNHHHHQKLASLRTPRIPSGKSASRSSRLIGAATKILEPGLQSRSRAKNSLTYPASMYPPKTGIVTNGVEDGSAIMQNQSCFETSSCKQLMGQTSCKNCGNLLDVLDCKLEVGRQSLVPPPIVSDVITATSMVSLEKKGKSFPPHGHERDVVLPRSQEKLISLVTEGKGKNNAQQSWSEPTARRMPMPHDGPAKWNSSCQPSRALEDDASSFALKHKTQTQEQMLSSERYSSGSTTSDMQVKRVSSSMSAVNGTKDFVAMNRSLSGRSRIRSLTKADGSKFDLEKKPYNRQQSSLSHVRTLERKRRIPNVTQLEGTGSVYSVGTKQRNLHSGGMGGKIRDFNASSLNNSIVKNKQDGQGERVIKVNDNKINDVVSFTFNSSLKQKIEIPGKREETSSDNESMVYFQRPSPLRVDALGAFLEQKLMELTSQRDEELATGAPPKKSSAMILQELISALSSEHLICHDGHHMFNENVCFHYGAKQERLLGTCCNGNHLSPGSVLEASFSSSSLDESSGHGFHPDPMNYSYYGQPEHDTELSDSATSFNKGRMDEILSDVVNQIPRALESLLTFGTELTRSKLNHMKDILLNSELVLRIATDRREDQGPQLLIYQFLVDDLDSMVSDAMWTDANGIVGCEDSKQRKELKGFLLDCVIEYLESNCCQYFNSGFKKWTKLPLCMEAEMLAQEVKREINKWLSMVGMVPDEIIEWEMSHSLGKWTDFDIEAFEAGVDIDGDILQILVDEVVQDLQVASRGTIYF* 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2437 948 MobiDBLite consensus disorder prediction 407 438 - -
Gso18g2437 948 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 9 938 - -
Gso18g2437 948 MobiDBLite consensus disorder prediction 196 216 - -
Gso18g2437 948 Pfam Domain of unknown function (DUF4378) 771 933 IPR025486 -
Gso18g2437 948 Pfam DUF761-associated sequence motif 93 119 IPR032795 -
Gso18g2437 948 PANTHER DNAA INITIATOR-ASSOCIATING PROTEIN 9 938 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2437 Gso-Chr18 57014941 57020430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2437 1 938 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 31.244 2.02e-77 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2437 - - gmx:100813026 1843.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2437 18 57014941 57020430 Gso8g3029 8 47993944 47998486 GST