Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2434 ATGGCTGAAATTGAATACCATGCAAAATCCAATACTAACACTCAACCCCTAAAGCTCTTTGGCATCAACATTAGCAAGTCCCCAGAAGATCAAACTCATGAAGCAGGTTCGAATTCTGAGCCTTTCAGTTCAAGAAAGTACGAGTGTCAGTACTGTTGCAGAGAATTTGCAAACTCACAGGCACTAGGAGGGCATCAAAACGCGCACAAGAAAGAAAGACAGCTCTTGAAACGTGCCCAAATGCAAGCTGCTCGTGGTTTTGTTTCTTCACAGATTCACAACACAATCATATCAAGCTTCTCACCACAGTCTCAGCCACCTTTGTCGTGGTTATGCACACCACATGGTGGTGCATATCATTCAGGAGCTGCCTTTGTGGCTTCTGGAAGACGAATCTATGTTGCAGCAGCTGGTGCCTCCATCACTGATGGCCATGGTCACCGCCACCCTCTGCCGCAGTTCGGTGGCTTCAACGGGGGTGAAGGTAGTGGTGGTGGTCGTGAACGAGGGTTAGGTTTGGATTTGCATCTTAGCCTGTGA 540 0.4796 MAEIEYHAKSNTNTQPLKLFGINISKSPEDQTHEAGSNSEPFSSRKYECQYCCREFANSQALGGHQNAHKKERQLLKRAQMQAARGFVSSQIHNTIISSFSPQSQPPLSWLCTPHGGAYHSGAAFVASGRRIYVAAAGASITDGHGHRHPLPQFGGFNGGEGSGGGRERGLGLDLHLSL* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2434 179 ProSiteProfiles Zinc finger C2H2 type domain profile. 47 74 IPR013087 -
Gso18g2434 179 PANTHER ZINC FINGER PROTEIN 5 1 179 IPR044299 GO:0010090
Gso18g2434 179 Gene3D Classic Zinc Finger 28 101 - -
Gso18g2434 179 ProSitePatterns Zinc finger C2H2 type domain signature. 49 69 IPR013087 -
Gso18g2434 179 PANTHER ZINC FINGER PROTEIN 6-LIKE 1 179 - -
Gso18g2434 179 SUPERFAMILY beta-beta-alpha zinc fingers 44 74 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2434 Gso-Chr18 57006341 57007330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2434 12 179 C2H2 Transcription Factor Family AT1G67030 44.500 2.03e-33 115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2434 18 57006341 57007330 Gso8g3032 8 48006712 48007646 GST