Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2410 ATGGCTTTACAGAACATTGGTGCTGCAAACAGTGATGATGCCTTCTACAGGTATAAGATGCCTAGGATGATTACCAAAATTGAGGGCAGAGGTAATGGCATCAAAACTAATGTTGTCAATATGGTTGACATTGCAAAGGCACTGGCAAGGCCTGCGTCTTACACGACCAAGTATTTTGGTTGTGAGCTTGGGGCCCAGTCAAAATTTGATGAGAAGACCGGCACTTCTCACGTCAATGGAGCACACGATACTGCTAAGCTTGCTGGCCTTCTTGAGAACTTCATTAAGAAATATGTCCAGTGTTATGGTTGTGGAAATCCTGAAACTGAGATCATAATTACTAAGAATCAAATGATCCAGCTGAAATGCGCAGCTTGTGGTTTTGTGTCTGATGTTGATATGAGAGACAAGCTGACTACCTTCATCATTAAGAACCCTCCAGAAGTTAAGAAAGGATCCAAAGACAAGAAGGCCATGAGGAGAGCTGAGAAGGAGAGACTGAAGGAAGGTGAATTAGCTGATGAGGAACAGAAGAAAGTGAAGAAAGAGGTTAAGAAGAAAGGCTCTTCATCTTCTAAGGATGGCACTAAATCCACCTCTTCAAAGAAGAAAGCAAGTGGCTCTGATGAAGACCGCACTTCACCTACTCACAGTCAAATTGATGAGAAAGAGGAGGCTCTAGATGAGGATGATGACGATGATGTGCAATGGCAGACAGATACGTCACTTGATGCTGCTCGTCAACGTATCCAAGAACAATTAAGTGCTGTGACAGCTGATATGGTTATGCTTTCTACAGATGAACCAGAGAAGAAAAAAGAAGCAAGTAATGGAAATGATGGTTCTCAGAATGGTAACTCAATGCACTGCAGGACCTTGGTTGGTGAAGTGAAAGCAAATTTGAAGAAAGGTGTTGGAGCAAATGAATTGCTGTCGCAACTTGCAGCACATCCTGTACCTGCTCAAGAAAAGATGAGTGCTCTGGTTGAAGCTTTGTTCGAGGGAACTGAGAAAGGTTTTGCTAAAGAAGCTGATAAAAAGAAGAACTACTTTTCTGTTGCTGTTGCGGATGAGGGATCCCAGCCGTTGTTGCTTCATGCTATTGAAGAGTTTTCTTGCAAGTCTACTTCAAATGCTTTGAAGGAGGTTGCCCTGGTTCTAAAGGCACTCTACGATGCTGATGTGTTAGAGGAAGAACACATAGTGCAGTGGTATCAAAAGGGACTGAAGGGTGATAACAAGAACTCTAGGATTTGGAAGAATGCTCAACCTTTCATTGATTGGCTTCAGAATGCAGAATCAGAAACTGAGGAAGAATAA 1320 0.4258 MALQNIGAANSDDAFYRYKMPRMITKIEGRGNGIKTNVVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSHVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKNQMIQLKCAACGFVSDVDMRDKLTTFIIKNPPEVKKGSKDKKAMRRAEKERLKEGELADEEQKKVKKEVKKKGSSSSKDGTKSTSSKKKASGSDEDRTSPTHSQIDEKEEALDEDDDDDVQWQTDTSLDAARQRIQEQLSAVTADMVMLSTDEPEKKKEASNGNDGSQNGNSMHCRTLVGEVKANLKKGVGANELLSQLAAHPVPAQEKMSALVEALFEGTEKGFAKEADKKKNYFSVAVADEGSQPLLLHAIEEFSCKSTSNALKEVALVLKALYDADVLEEEHIVQWYQKGLKGDNKNSRIWKNAQPFIDWLQNAESETEEE* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2410 439 MobiDBLite consensus disorder prediction 148 223 - -
Gso18g2410 439 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Gso18g2410 439 ProSiteProfiles W2 domain profile. 280 439 IPR003307 GO:0005515
Gso18g2410 439 Pfam eIF4-gamma/eIF5/eIF2-epsilon 363 439 IPR003307 GO:0005515
Gso18g2410 439 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Gso18g2410 439 Gene3D - 2 104 - -
Gso18g2410 439 SMART 542_3 348 435 IPR003307 GO:0005515
Gso18g2410 439 Gene3D - 105 145 - -
Gso18g2410 439 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 439 IPR045196 GO:0003743|GO:0006413
Gso18g2410 439 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Gso18g2410 439 MobiDBLite consensus disorder prediction 267 288 - -
Gso18g2410 439 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 11 101 IPR016189 GO:0003743|GO:0006413
Gso18g2410 439 MobiDBLite consensus disorder prediction 147 235 - -
Gso18g2410 439 CDD W2_eIF5 323 437 - -
Gso18g2410 439 Gene3D - 287 430 - -
Gso18g2410 439 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-1-RELATED 1 439 - -
Gso18g2410 439 SUPERFAMILY ARM repeat 292 433 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2410 Gso-Chr18 56801919 56804545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2410 1 432 Eukaryotic Initiation Factors Gene Family AT1G77840 62.642 2.03e-177 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2410 K03262 - gmx:100796346 790.03