Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2398 ATGGCCAAAAACCAGGGATTTGCCGTAGGAATCGACCTTGGTACAACCTACTCGTGTGTTGCAGTGTGGCAGGGGCAACAAAATAGAGTAGAAATAATTCACAACGACCAAGGGAACAGAACTACACCTTCTTTTGTCGCTTTCACTGACGATCAAAGGTTGATTGGTGATGCTGCTAAGAATCAGGCTGCAACCAACCCAGAAAACACTGTCTTTGATGCCAAGAGGTTAATTGGTAGGAAATACAGCGATCCCACTATTCAAAATGATAAAATGTTATGGCCATTCAAGGTCATAGCTGATAATAATGACAAACCCATGATCACCGTTAAATACAAGGGCCACGAGAAGCTCCTTTCAGCAGAGGAAGTGTCATCTATGATCCTCATGAAAATGCGGGAGATTGCTGAGGCATATTTGGAAACACCGGCAAAGAGTGCTGTTGTTACAGTGCCTGCTTATTTCAATGATTCTCAGCGTAAAGCCACCATAGATGCTGGAACCATAGCTGGCCTTAATGTTATGCGGATAATCAATGAACCCACTGCAGCAGCTATTGCATATGGCCTTGACAAGAAAATTAACTGTGTTGGAGAGCGTAACATTTTTATCTTTGACCTTGGTGGTGGTACTTTTGATGTTTCTCTCCTTACAATTAAGGACAAGGTCTTCCAAGTCAAGGCTACTGCAGGGAACACCCACCTTGGGGGAGAGGACTTCGACAACAGAATGGTGAATTACTTGGTGCAGGAGTTCAAAAGAATGAACAAGGTCGACATTAGTGGTAACCCCAGAGCTTTACGAAGGTTGAGAACTGCGTGCGAAAAGGCGAAAAGGACACTCTCGTTTGCTGTTACAACCACAATTGAGGTTGATTCATTATCTAAAGGCATTGATTTCGGCATTTCAATCACTCGTGCAAAGTTTGAGGAACTAAATATGGATCTCTTTGAGAAGTGTCTGAAGACTGTTAAGAAGTGTCTTAAAGATGCAAAGACGGACAAGAGCAGTGTACATGATGTTGTCCTTGTTGGTGGTTCTTCGAGGATTCCCAAAGTGCAGGAACTATTGCAGGAATTCTTTGAGGGAAAGGATTTGTGCAAGAGTATCAACCCTGACGAGGCTGTCGCTTATGGAGCTGCCGTGCAGGCTGCTTTGTTGAGTGATGACATTCAGAATGTTCCAAATTTGGTTTTGTTGGATGTTGCACCGCTGTCACTTGGTATATCCACAAAAGGAGATCTCATGAGTGTTGTGATTCCTAGGAATACTACTATTCCAGTTAAGAGGACTCAAGAATATTTTACAGTGGAAGATAACCAAACCTCTGCGCGTATTGAGGTTTATGAAGGCGAGAGAACCAGAGCAAATGATAACAATTTGCTTGGTTTCTTTAGTCTTTTGGGATTGGTTCCTGCTCCTCGTGGCCATCCTGTGGATGTATGCTTTACAATAGATGTAAATGGCATTCTATCTGTTTCTGCGGAGGAAACAACCACTGGTTATAGGAATGAGATTACCATAACCAATGACCAAAAAAGGCTTTCAGCTGAGCAGATTAAAAGAATGATTCATGAAGCTGAGAAATATCAGGTTAATGATATGAAGTTCATGAAGAAGGCTAATACAATGAATGCTTTGGATCACTATGTTTACAAGATGAGGAATGCATTGAATAATAAGAATATCAGTTCAAAGCTTTGTTTACAAGAAAGGAAGAAAATCAAATCTGTAATTACAAAGGCGACTGATTTGCTTGAGGGTGATAATCAGCGGGATAAAATAGAGGTGTTTGAGGATCATCTAAATGAGATTGTGAACCTCTTTGATCGTGTCATTGGCAAGTTTGCTTAG 1854 0.4153 MAKNQGFAVGIDLGTTYSCVAVWQGQQNRVEIIHNDQGNRTTPSFVAFTDDQRLIGDAAKNQAATNPENTVFDAKRLIGRKYSDPTIQNDKMLWPFKVIADNNDKPMITVKYKGHEKLLSAEEVSSMILMKMREIAEAYLETPAKSAVVTVPAYFNDSQRKATIDAGTIAGLNVMRIINEPTAAAIAYGLDKKINCVGERNIFIFDLGGGTFDVSLLTIKDKVFQVKATAGNTHLGGEDFDNRMVNYLVQEFKRMNKVDISGNPRALRRLRTACEKAKRTLSFAVTTTIEVDSLSKGIDFGISITRAKFEELNMDLFEKCLKTVKKCLKDAKTDKSSVHDVVLVGGSSRIPKVQELLQEFFEGKDLCKSINPDEAVAYGAAVQAALLSDDIQNVPNLVLLDVAPLSLGISTKGDLMSVVIPRNTTIPVKRTQEYFTVEDNQTSARIEVYEGERTRANDNNLLGFFSLLGLVPAPRGHPVDVCFTIDVNGILSVSAEETTTGYRNEITITNDQKRLSAEQIKRMIHEAEKYQVNDMKFMKKANTMNALDHYVYKMRNALNNKNISSKLCLQERKKIKSVITKATDLLEGDNQRDKIEVFEDHLNEIVNLFDRVIGKFA* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2398 617 Gene3D - 9 385 - -
Gso18g2398 617 Gene3D Actin; Chain A, domain 4 236 319 - -
Gso18g2398 617 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 616 - -
Gso18g2398 617 PANTHER HEAT SHOCK PROTEIN 70KDA 4 616 IPR013126 GO:0005524|GO:0140662
Gso18g2398 617 SUPERFAMILY Actin-like ATPase domain 199 388 IPR043129 -
Gso18g2398 617 Gene3D - 193 367 - -
Gso18g2398 617 Gene3D - 545 617 IPR029048 -
Gso18g2398 617 SUPERFAMILY Actin-like ATPase domain 7 192 IPR043129 -
Gso18g2398 617 ProSitePatterns Heat shock hsp70 proteins family signature 3. 341 355 IPR018181 -
Gso18g2398 617 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 393 547 IPR029047 -
Gso18g2398 617 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 392 544 IPR029047 -
Gso18g2398 617 Pfam Hsp70 protein 8 606 IPR013126 GO:0005524|GO:0140662
Gso18g2398 617 ProSitePatterns Heat shock hsp70 proteins family signature 2. 204 217 IPR018181 -
Gso18g2398 617 PRINTS 70kDa heat shock protein signature 7 20 - -
Gso18g2398 617 PRINTS 70kDa heat shock protein signature 37 49 - -
Gso18g2398 617 PRINTS 70kDa heat shock protein signature 59 67 - -
Gso18g2398 617 PRINTS 70kDa heat shock protein signature 147 167 - -
Gso18g2398 617 PRINTS 70kDa heat shock protein signature 210 220 - -
Gso18g2398 617 PRINTS 70kDa heat shock protein signature 338 354 - -
Gso18g2398 617 PRINTS 70kDa heat shock protein signature 370 390 - -
Gso18g2398 617 PRINTS 70kDa heat shock protein signature 396 415 - -
Gso18g2398 617 PRINTS 70kDa heat shock protein signature 476 492 - -
Gso18g2398 617 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 544 616 IPR029048 -
Gso18g2398 617 ProSitePatterns Heat shock hsp70 proteins family signature 1. 11 18 IPR018181 -
Gso18g2398 617 Gene3D - 72 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2398 Gso-Chr18 56692734 56694750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2398 2 616 Calmodulin-binding Proteins AT3G12580 67.099 0.0 854
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2398 K03283 - gmx:102667578 926.006