Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2382 ATGGTTCTCTATCTATCTTTCTTTTCATTGCAAATTTACGATTCTCCTCCGAAACACGACCACAACCAAATTAACTTGCAAAAGACTCTGCGCAAACAGATTGCAGTTTACACAACCATCTGTGAACAACTCATCGAAATGCACAAAAACATCTCCTCGCACCAAGATCTTGCAGGGTTTAGGCTGGGGAATATGTATTGTGACCCATTGTTGGGGTCTGGTGGGCACAAAATAGCTTCAAGGCAGCGGTGGACTCCGACCGCTATGCAGCTTCAGATTCTTGAGCGAATATTTGATCAAGGGACTGGAACCCCCACCAAAGAAAAGATCAAGGAGATCACTAATGAGCTCAGCCAGCATGGCCAGATTTCTGAGACCAATGTGTATAATTGGTTCCAGAACAGGCGGGCTCGCTCCAAAAGAAAGCAGCAGAATGTGGCACCTAGTGCTAATGCTGAATCGGAAGTGGAGACTGAGGTTGATTCTAAGGATAAGAAGACAATGCCGGATGAATTTCAGTCCCCTCCTAGCTTTTCTGCTGTGCCTGCTGATGATAATTTAGGCTTCCAGAACCATGGCAGTTTGCAGTACTTGAATCCAGAGTCCAACAAACCAGATTCTGTGTTCCCATCTGATGAAAGTTTAAGATCTACAAGAAATTTCAATCATGTGCCTGTTTTTGATGGGCTGCTATCGAACACAAGGAGCGACTATCTTACTGGAAAAATGGAAGCACCTGAGAACTATGACTTATACCAGCCAGCAGGCGACTTCAACATGGCATGTTGA 789 0.4474 MVLYLSFFSLQIYDSPPKHDHNQINLQKTLRKQIAVYTTICEQLIEMHKNISSHQDLAGFRLGNMYCDPLLGSGGHKIASRQRWTPTAMQLQILERIFDQGTGTPTKEKIKEITNELSQHGQISETNVYNWFQNRRARSKRKQQNVAPSANAESEVETEVDSKDKKTMPDEFQSPPSFSAVPADDNLGFQNHGSLQYLNPESNKPDSVFPSDESLRSTRNFNHVPVFDGLLSNTRSDYLTGKMEAPENYDLYQPAGDFNMAC* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2382 262 PANTHER WUSCHEL-RELATED HOMEOBOX 13 28 261 IPR044559 GO:0003700
Gso18g2382 262 SMART HOX_1 79 146 IPR001356 GO:0003677
Gso18g2382 262 ProSiteProfiles 'Homeobox' domain profile. 77 142 IPR001356 GO:0003677
Gso18g2382 262 Pfam Homeodomain 81 141 IPR001356 GO:0003677
Gso18g2382 262 PANTHER - 28 261 - -
Gso18g2382 262 SUPERFAMILY Homeodomain-like 79 144 IPR009057 -
Gso18g2382 262 MobiDBLite consensus disorder prediction 139 214 - -
Gso18g2382 262 MobiDBLite consensus disorder prediction 156 170 - -
Gso18g2382 262 CDD homeodomain 81 143 IPR001356 GO:0003677
Gso18g2382 262 Gene3D - 82 147 - -
Gso18g2382 262 MobiDBLite consensus disorder prediction 189 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2382 Gso-Chr18 56606381 56611876 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2382 28 261 Wox Gene Family AT4G35550 51.271 9.68e-72 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gso18g2382 Homeodomain 7.5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2382 - - gmx:100784355 461.455