Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2370 ATGGTGAACGTGATGGAGTGGCAGAAGCAGCGTTGGCAACCGAATGGGAACGCGGAAATGATGTACGTGAAAGTGATGACCGACGAACAGCTCGAGACTCTGCGCAAACAGATTGCAGTTTACGCAACCATCTGTGAACAACTCATCGAAATGCACAAAAACATCTCCTCGCACCAAGATCTTGCAGGGATTAGGCTGGGGAATATGTATTGTGATCCATTGTTGGGGTCTGGTGGGCACAAAATAGCTTCAAGGCAGCGGTGGACTCCGTCCGCTATGCAGCTTCAGATTCTTGAGCGAATATTTGATCAAGGGACTGGAACCCCCACCAAGGAAAAGATCAAGGAGATCACTAATGAGCTCAGCCAGCATGGCCAGATTTCTGAGACCAATGTGTATAATTGGTTCCAGAACAGGCGTGCTCGCTCCAAAAGAAAGCAGCAGAATGTGGCACCTAGTGCTAATGCTGAATCGGAAGTGGAGACTGAGGTTGATTCTAAGGATAAGAAGACAAAGCCGGACGAATTTCAGTCCCCTCCTAGCGTTTCTGCTGTGCCTGCTGATGATAATTTAGGCTTCCAGAACCATGGCAGTTTGCAGTACTTGAATCCAGAGTCCAACAAACCAGATTCTGTGTTCCCATCTGATGCAAGTTTAAGATCTACAAGAAATTTCAATCATGTGCCTGTTTTTGATGGGCTGCTATCGAACTCAACGAGTGACTATCTTACTGGAAAAATGGAAGCACCTGAGAACTACGACTTATACCAGCCAGCAGGCGACTTCAACATGGCAGGTTGA 801 0.4719 MVNVMEWQKQRWQPNGNAEMMYVKVMTDEQLETLRKQIAVYATICEQLIEMHKNISSHQDLAGIRLGNMYCDPLLGSGGHKIASRQRWTPSAMQLQILERIFDQGTGTPTKEKIKEITNELSQHGQISETNVYNWFQNRRARSKRKQQNVAPSANAESEVETEVDSKDKKTKPDEFQSPPSVSAVPADDNLGFQNHGSLQYLNPESNKPDSVFPSDASLRSTRNFNHVPVFDGLLSNSTSDYLTGKMEAPENYDLYQPAGDFNMAG* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2370 266 Gene3D - 86 151 - -
Gso18g2370 266 MobiDBLite consensus disorder prediction 193 215 - -
Gso18g2370 266 MobiDBLite consensus disorder prediction 143 215 - -
Gso18g2370 266 PANTHER WUSCHEL-RELATED HOMEOBOX 13 3 265 IPR044559 GO:0003700
Gso18g2370 266 MobiDBLite consensus disorder prediction 160 175 - -
Gso18g2370 266 ProSiteProfiles 'Homeobox' domain profile. 81 146 IPR001356 GO:0003677
Gso18g2370 266 SUPERFAMILY Homeodomain-like 83 148 IPR009057 -
Gso18g2370 266 PANTHER - 3 265 - -
Gso18g2370 266 SMART HOX_1 83 150 IPR001356 GO:0003677
Gso18g2370 266 CDD homeodomain 85 147 IPR001356 GO:0003677
Gso18g2370 266 Pfam Homeodomain 85 145 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2370 Gso-Chr18 56510099 56513430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2370 21 266 Wox Gene Family AT4G35550 52.823 6.12e-80 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gso18g2370 Homeodomain 1.8e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2370 - - gmx:100784355 544.658