Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2369 ATGGCAACAAATGGCAAGACACCTGCGATAGGAATCGATTTGGGCACGACATACTCATGCGTTGCAGTGTGGCAGCGTGATCGAGTGGAGATCATCGCGAACGACCAAGGAAACAGAACAACACCCTCTTATGTTGCTTTCAATAACACCCAAAGGATGATTGGTGATGCTGCCAAGAACCAGGCTGCTACCAATCCAACCAACACTGTCTTTGACGCAAAGCGCCTAATTGGTAGGAGATTTAGTGATCAAGAGGTTCAAAGTGATATGGAGCTATGGCCATTCAAAGTCATTGCTGATGTTAATGGCAAACCAATGATTGCTGTTGATTACAATTGTGAGAAAAAGCAATTTTCTGCAGAAGAAATTTCATCCATGGTTTTGGCAAAGATGCTTGACATTGCAGAGTCTTTCCTTGGATCAACAGTGAAGAATGCTGTTATCACTGTGCCTGCTTACTTCAATGATTCTCAGCGACAAGCTACTAAAGATGCTGGTGCCATTGCTGGCCTCAATGTTTTGAGAATCCTCCATGAGCCAACTGCTGCTGCAATTGCATATCGGCTTGAAATGAAAAATTGTAATAATGATAGAAGGAACGTTTTTGTGTTTGATCTTGGTGGTGGTACTTTGGATGTGTCTCTTCTTGTTTTTGAGAAGGATCATATCCGAGTTAAGGCAACATCTGGAGACACTCACCTCGGAGGAGAGGACTTCGATAACAATATGGTGACTTACTGTGTGAAAGAGTTTAAGAGAAAGAATAAAATGGACATTAGTGGAAACAAAAGAGCCCTTAGGAGGTTGAGGACTGCTTGTGAGAAAGCAAAGAGGATACTCTCATGCTCTACAATGACCACCATTGAGGTAGACTCTTTGTATGATGGTATTGATTTCCACTCATCAATAAGTCGCGCAAAGTTTGAGGAACTCAACAAGGACTACCTTAACAAGTGTATTGAGTTTGTAGGGAAGTGTCTGATAGATGCTAAGATGGACAAGAGTAGTGTTCATGATGTTGTCCTCGCAGGTGGATCTACTAGGATTCCCAAATTGCAGCAACTATTAAGTGACTTCTTTGATGGGAAGGATCTCTGCAAATGCATCAATGCTGATGAGGCCGTTGCATATGGTGCTGCTGTCCATGCTTATATGCTTAATGGTGAGTCCAGTGAGAAGGTTCAAAACGCTTCACTTTGGGAAGTCACTCCTCTTTCCCTTGGGTTGCAAGAAGATGGAGGTATCATGAAAGTAATCATTCCTAGGAATACTAGCATTCCTACAAAGATGGAAGATGTACTCACAACACATTTTGATAACCAAACCAATATCTTGATTCATGTATACGAGGGTGAGAGGAAAAGAACTAGAGACAACAACTTGTTGGGTAAGTTTGTGCTAGAAATTCCTCCAGTTCCGCGTGGTGTTCCTCAAATTAGCGTTTGCTTTGAACTTGATTATGATGGCATCCTACATGTTTCTGCCGAGGAAAAATCTAGGGGAATATCCAAGAAGCTGGCCATAACAAATGACAAAGGAAGGCTTTCGAAGAAAGAAATTGAAAGGATGATATCAGAAGCAGAGAAGTACAAAGCTGAAGATGAGATGTATAGGAACAAGGTACAATCAAGGCATGCATTGGAGAAGTACGCTTACAACATGAGGGATGCTATAAACATTAAGGAGATTAGCTTGAAGCTTTCTCCAGAAGACAAGAAAAATATCAATGATGCAATTGATTCTGCCTTAGAGTGGCTCGAGGTCAGCATGGATGCAAAACAAAATGATTTTGACAACATGCGGAGCACTCTTTCTAGCGTTTTTAATCCAGTTATTGTGAAGATGATAAAGGATGAGGATAATGTTGCGCCTCCAGATACTGTTGCTAGCTCTGGTAGCAATAGTGTGAAGAATGGCTTGTTATCAATATTGGCAAATTTTGCTCTCGAGGCAGTGTATTCAGCTGCTACAGGTGATATCATTGGATTTGCTTCCGTGATTGTTGACTGTTTGTCAAATTAG 2022 0.4144 MATNGKTPAIGIDLGTTYSCVAVWQRDRVEIIANDQGNRTTPSYVAFNNTQRMIGDAAKNQAATNPTNTVFDAKRLIGRRFSDQEVQSDMELWPFKVIADVNGKPMIAVDYNCEKKQFSAEEISSMVLAKMLDIAESFLGSTVKNAVITVPAYFNDSQRQATKDAGAIAGLNVLRILHEPTAAAIAYRLEMKNCNNDRRNVFVFDLGGGTLDVSLLVFEKDHIRVKATSGDTHLGGEDFDNNMVTYCVKEFKRKNKMDISGNKRALRRLRTACEKAKRILSCSTMTTIEVDSLYDGIDFHSSISRAKFEELNKDYLNKCIEFVGKCLIDAKMDKSSVHDVVLAGGSTRIPKLQQLLSDFFDGKDLCKCINADEAVAYGAAVHAYMLNGESSEKVQNASLWEVTPLSLGLQEDGGIMKVIIPRNTSIPTKMEDVLTTHFDNQTNILIHVYEGERKRTRDNNLLGKFVLEIPPVPRGVPQISVCFELDYDGILHVSAEEKSRGISKKLAITNDKGRLSKKEIERMISEAEKYKAEDEMYRNKVQSRHALEKYAYNMRDAINIKEISLKLSPEDKKNINDAIDSALEWLEVSMDAKQNDFDNMRSTLSSVFNPVIVKMIKDEDNVAPPDTVASSGSNSVKNGLLSILANFALEAVYSAATGDIIGFASVIVDCLSN* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2369 673 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Gso18g2369 673 Gene3D Actin; Chain A, domain 4 235 318 - -
Gso18g2369 673 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 37C-RELATED 2 623 - -
Gso18g2369 673 Coils Coil 520 540 - -
Gso18g2369 673 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 548 IPR029047 -
Gso18g2369 673 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Gso18g2369 673 Gene3D - 545 617 IPR029048 -
Gso18g2369 673 PRINTS 70kDa heat shock protein signature 8 21 - -
Gso18g2369 673 PRINTS 70kDa heat shock protein signature 36 48 - -
Gso18g2369 673 PRINTS 70kDa heat shock protein signature 58 66 - -
Gso18g2369 673 PRINTS 70kDa heat shock protein signature 146 166 - -
Gso18g2369 673 PRINTS 70kDa heat shock protein signature 209 219 - -
Gso18g2369 673 PRINTS 70kDa heat shock protein signature 337 353 - -
Gso18g2369 673 PRINTS 70kDa heat shock protein signature 369 389 - -
Gso18g2369 673 PRINTS 70kDa heat shock protein signature 396 415 - -
Gso18g2369 673 PRINTS 70kDa heat shock protein signature 476 492 - -
Gso18g2369 673 SUPERFAMILY Actin-like ATPase domain 196 387 IPR043129 -
Gso18g2369 673 Gene3D - 71 126 - -
Gso18g2369 673 SUPERFAMILY Actin-like ATPase domain 8 190 IPR043129 -
Gso18g2369 673 PANTHER HEAT SHOCK PROTEIN 70KDA 2 623 IPR013126 GO:0005524|GO:0140662
Gso18g2369 673 Pfam Hsp70 protein 9 615 IPR013126 GO:0005524|GO:0140662
Gso18g2369 673 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Gso18g2369 673 Gene3D - 192 366 - -
Gso18g2369 673 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 544 IPR029047 -
Gso18g2369 673 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 619 IPR029048 -
Gso18g2369 673 Gene3D - 10 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2369 Gso-Chr18 56499806 56506978 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2369 1 632 Calmodulin-binding Proteins AT3G12580 66.509 0.0 874
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2369 K03283 - gmx:100783822 1318.91