Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2363 ATGTCTTATCAGCATAAAAGCTTTTGGATGCCACGGGATGCTGGCTGCATGGCTGAAGAAAATGCGGGATATGAAAATTCTTCCAGAATTGAACCCAAGCGCAGTCATCAGTGGTTTATGGATACAGGTGAACCTGAAATATTCAGCAACAAGAAACAAGCAGTTGAAGCTGTTAGTGGCAGGCCAATTTCTGGAGTTTCACATGCAAATGTTTCCCAATGGGACACCAATTCAGGATTTCACTCAGTCACAAGTCAATTTTCTGACCGTCTTTTTGGATCTGATCTTGCTAGGACTGTGAATTTGGTTGATAAGAATGTGCCATCTATTGTAAGTGGAAATCTGAACATGGGAAGGAAAGATTTTGAGCATCAATTTGGTAATGATCCTTCTGTGGGATTGTCAATATCCCATTCCATAGCAGACCCTTCATCATGTCTCAATTTTGGTGGCATCAGAAAAGTTAAAGTTAATCAAGTCAGAGATTCTGACAACTGCATGCCTGCTGCATCCATGGAGCCCTCCTATAGTAGGGAAGATAATAGTACAATTTCAGTAGGTGCTGGCTACAATAAGAATGATGGCGACAATATTTCATTGGGTCCTACTTATAACAATGGAAATGACAACACCATTGCTATGGGGAGCAGAATTAGTAAGACTGACGACAATCTTTCAATGGCTCACACCTTCAGTAAAGGGGATGGGGGTTTTATGTTGATGGGCCACAATTATGGCAAGGGAGATGAAAGTATCGTATCAATGGGTCAGCCCTTTGACAAGGGAGATGGAAATTTCATATCAATGGGTCAATCATATGAGAAGGAAGATGGCAATTTAATATCTCTGGGCACCTCATATACCAAGGTACATGAAAGCTTTATACCAGTTGGTCCAACCTATGGTAAATCAGGAGAAAATTTCATAACTGTTGCTCCTTATGACAAGGGTACTAATCATATAATATCAATGGGTCCAACATATGATAAGGTGGATTCAAATATTGCATCAACAGTTCCATCATATGACAGAGGAGATTCTAGTTCCTTACTTGTGGGTCAAAACCACCATAAGGGTCAGAGCAGTTCCATTTCTTTTGGAGGTTTTCATGATGACCCTGAACCAAATACCCCTGGTGGAATCATTAGTGGCTATGATCTGTTGATAGGAGGCCAGAACTCAGCTCAAGGATTGGATAGCCAGAACGACCTGACTGAGACAAACACTGAATCACTTGTAAATAGCATTCCAAAACCCAATACTAAAAATGATATTGTTGTTAAGAACAAAGAGCCAAAGACAACCAAGAAGGCTCCTACTAACAACTTCCCTTCAAATGTCAAAAGTTTGCTTTCAACTGGTATTTTTGATGGTGTTCAGGTGAAATATGTTTCGTGGTCACGGGAGAAAAGTCTTAAGGGAATAATAAAAGGAACTGGGTATTTGTGTTCATGTGACAACTGCAACCAGTCAAAGGCTCTTAATGCTTACGAGTTTGAGCGTCATGCTGGTGCTAAGACAAAACATCCTAACAATCACATATACTTTGAGAATGGAAAAACCATCTATGCTGTTGTTCAAGAGCTGAAAAATACTAATCAGGATATGCTTTTTGATGCTATTCAAAATGTGACTGGCTCTACCATCAACCAAAAGAACTTTCGAATATGGAAAGCATCATACCAAGCTGCTACTCGGGAGCTTCAGCGTATCTATGGAAAGGATGAAGTGGTCATTCCTTCATGA 1746 0.4021 MSYQHKSFWMPRDAGCMAEENAGYENSSRIEPKRSHQWFMDTGEPEIFSNKKQAVEAVSGRPISGVSHANVSQWDTNSGFHSVTSQFSDRLFGSDLARTVNLVDKNVPSIVSGNLNMGRKDFEHQFGNDPSVGLSISHSIADPSSCLNFGGIRKVKVNQVRDSDNCMPAASMEPSYSREDNSTISVGAGYNKNDGDNISLGPTYNNGNDNTIAMGSRISKTDDNLSMAHTFSKGDGGFMLMGHNYGKGDESIVSMGQPFDKGDGNFISMGQSYEKEDGNLISLGTSYTKVHESFIPVGPTYGKSGENFITVAPYDKGTNHIISMGPTYDKVDSNIASTVPSYDRGDSSSLLVGQNHHKGQSSSISFGGFHDDPEPNTPGGIISGYDLLIGGQNSAQGLDSQNDLTETNTESLVNSIPKPNTKNDIVVKNKEPKTTKKAPTNNFPSNVKSLLSTGIFDGVQVKYVSWSREKSLKGIIKGTGYLCSCDNCNQSKALNAYEFERHAGAKTKHPNNHIYFENGKTIYAVVQELKNTNQDMLFDAIQNVTGSTINQKNFRIWKASYQAATRELQRIYGKDEVVIPS* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2363 581 MobiDBLite consensus disorder prediction 396 422 - -
Gso18g2363 581 Pfam Tify domain binding domain 474 529 IPR032308 -
Gso18g2363 581 PANTHER N-LYSINE METHYLTRANSFERASE 1 581 - -
Gso18g2363 581 MobiDBLite consensus disorder prediction 396 424 - -
Gso18g2363 581 MobiDBLite consensus disorder prediction 353 367 - -
Gso18g2363 581 MobiDBLite consensus disorder prediction 353 383 - -
Gso18g2363 581 PANTHER AUTOIMMUNE REGULATOR 1 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2363 Gso-Chr18 56451580 56456612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2363 433 562 PHD Transcription Factor Family AT3G53680 55.385 6.41e-41 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2363 - - gmx:100782217 1176