Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2361 ATGGCGGATACAATTGTGGTTTTCCTGATAGAAAAGTTGACGAGGTTGTTAGCAGAAGAAGCCAAACTACTTGGTAGCGCGCACGACAAAGTAACATCGTTGCGCAACGAGCTGAGGTTCATGAACCTCTTCCTCAACAACTCCCAAGGCAAGCGCAAAGATCACAACATGGTCGCGGAACTCGTTGACCAAATCAGAGACATCGCCCACGAAGCCGAAGACGTCATCGACAACTACATCAGCGACATGATCAAGCAGAGAAGGAGAAACATGCTGGAGAAGTTTGGCCGCGGCGTAGACCACGCGCTCATGCTTCGCAACTTGACCGTCAAAATAGACAGGATCAAGACCACCATCAACGATATCTTCGACAATAAGGTCAAGTACGGCATCGAAGCTGGAAGGAGAGACAGCGAGGAAGAAGCAGAGCGTATACGGAAGCAAAGAAGAGACGTGGAGGAACAAGAGGTTGTAGGATTTGCGCATGACTCCAAGGTTGTAATTGAGAAACTCATGGCATCGGGTTCGCGCCTTAAACTGGTTTCCATCGTCGGTATGGGTGGTTTGGGTAAGACCACCCTAGCCAGAAAAATATACAACAGCAACAGGGTCAAGAACACGTTTCCTTGTCGCGCATGGGGTTATGCCTCTAACGATTATCGACCCAGGGAATTCTTCTTAAGCCTTCTCAAGTGTTTGTTGTCCACGTCTAAGTACAACGATTTGTTCAAGAAAAGAGAGGAGGCAAGTAGAAGCGAGGAGGAGCTGAAGATGAAGGTGCGAGAATGCTTGAGCAGAAGCGGTGGCAAGTACTTGGTGGTGGTGGACGATGTGTGGCAAAGCCAAGTGTGGGATGAGGTTAAAGGTGCTTTCCCTGATGACAGCAATGGAAGCAGAATATTGATAACTACTCGTCATGCTGAGGTGGCTTCTCACGCAGGTCCAATGCCTCCCTACTTTCTCCCCTTCCTCACCGAAGAAGAAAGCTGGGAGCTTCTTTCCAAGAAGGTGTTTAGGGGCGAAGATTGTCCTTCTGATTTGGAGCCCATGGGAAAATTGATCGCTGAAAGCTGTAATGGGTTGCCACTTGCCATCATCGTCATGGCGGGGATTCTTGCAAACAAGAAGTCACTGAGGGATTGGTCTAGAATCAAGGATCATGTGAATTGGCATCTTGGCAGGGACACCACACTCAAGGATATACTGAAACTCAGCTATGACACCTTGCCAGCGAGGTTGAAGCCTTGCTTTCTGTATTTTGGGATGTACCCTGAAGACTACAAGATCCCCGTGAAGCAATTGATCCAGTTGTGGATATCTGAAGGGCTATTAACACAAGAAACTTGCGGAAGCAGCACCAACATACCGGAGCCGGAATACATTGCGGAAGAGTACTTGGATGAACTAGTGGACCGAAGCTTGATCCAAGTGGTGAGTAGGACCAGCGACGGGGGTGTCAAAACATGCCGGATTCATGATCTTCTCCGCGATCTTTGCATATCCGAGAGCAAGGAAGACAAGTTTTTCGAGGTTTGTGGAGAGGTTGATTTTCAAATCCGAGATAGTTGTCCCCGTAAGTTGTCTCTCCACGGCACTCTATTTCATTTCTCTTCTTCAAGTGCCGTTTCTGATTACTCCATCACTGGCACGCGTTCCTTGTTATGCTTCGGCCAAGAAGTGTACAAGGTCAAGCCAAACCACTGGAGATGGCTTCTCAAGAGTTTCAGGCTGGCTCGCGTGTTGGATTTAGGACGAATGAATGTTAACTCAATACCCAATGATTTGGAGAAGCTCATCCATTTAAGGTACTTGAGAATACACTCATACAACATTGAAACTATTCCAGCTTCTATATGTAGGTTGTGGAATCTTGAAACCTTGGACTTAAGGGGTTCTCCCATAAAATCATTTTCTGGTGACTTGTGGCAACTTAAGCAACTAAGGCATCTTCTGATGTTTGGACCTGTGGGGCTTCCAGACATGCCATCAGAGAGTAAAACTATGCAGAATCTTCAAACTCTCTCTACAGTGGCGCTTGATCCACGCACAACTTCATTGTTGGATAGTCGTAGATTCCCCAGGTTGACAAAATTGGGTATACACCATGAAAGACGTGATAAGTGCAATGCTCGTATACAGTTACAAAGCCTTAACCGCTTAAGCCATCTCCGCAAGCTAAAAGTGATTGGCACCACGGAGATTCCGCAAAATGCAAATGTGTTTCCCTCAAACATCACCAAAATATCCCTCACAAAGTTTGGTTGCTTCAACTCCAATGCCATGCATATACTAGGAAAGCTTCCCAGCCTCCAAGTTCTGAAACTGTCATCGCAGACAAATGATACTCGTTTTGACCTCCACTGTGCCACGGGAGGGTTCCTTCAGCTCCAAGTGTTTGAGATGATAGCAATCAAGGTAAAAAATTGGAGACTTGACAAAGGTTCAATGCCACGCATTCGACGTTTAGACGTTAGAAGCTGCAAATCCTTGACGGAGCTTCCAAAAGAACTATGGTCTTTGACTAGCTTGCGGGAAGTGCAGGTCTTGTGGCCATGTACTGAATTGGTAAAAAGGCTCCAAAATTTGGTGGTGAACAATGGGTGCAAGCTCGTGGTCTATCCTCTCTCAACAAATGATGAATTAGATTTTCTCTAA 2655 0.4652 MADTIVVFLIEKLTRLLAEEAKLLGSAHDKVTSLRNELRFMNLFLNNSQGKRKDHNMVAELVDQIRDIAHEAEDVIDNYISDMIKQRRRNMLEKFGRGVDHALMLRNLTVKIDRIKTTINDIFDNKVKYGIEAGRRDSEEEAERIRKQRRDVEEQEVVGFAHDSKVVIEKLMASGSRLKLVSIVGMGGLGKTTLARKIYNSNRVKNTFPCRAWGYASNDYRPREFFLSLLKCLLSTSKYNDLFKKREEASRSEEELKMKVRECLSRSGGKYLVVVDDVWQSQVWDEVKGAFPDDSNGSRILITTRHAEVASHAGPMPPYFLPFLTEEESWELLSKKVFRGEDCPSDLEPMGKLIAESCNGLPLAIIVMAGILANKKSLRDWSRIKDHVNWHLGRDTTLKDILKLSYDTLPARLKPCFLYFGMYPEDYKIPVKQLIQLWISEGLLTQETCGSSTNIPEPEYIAEEYLDELVDRSLIQVVSRTSDGGVKTCRIHDLLRDLCISESKEDKFFEVCGEVDFQIRDSCPRKLSLHGTLFHFSSSSAVSDYSITGTRSLLCFGQEVYKVKPNHWRWLLKSFRLARVLDLGRMNVNSIPNDLEKLIHLRYLRIHSYNIETIPASICRLWNLETLDLRGSPIKSFSGDLWQLKQLRHLLMFGPVGLPDMPSESKTMQNLQTLSTVALDPRTTSLLDSRRFPRLTKLGIHHERRDKCNARIQLQSLNRLSHLRKLKVIGTTEIPQNANVFPSNITKISLTKFGCFNSNAMHILGKLPSLQVLKLSSQTNDTRFDLHCATGGFLQLQVFEMIAIKVKNWRLDKGSMPRIRRLDVRSCKSLTELPKELWSLTSLREVQVLWPCTELVKRLQNLVVNNGCKLVVYPLSTNDELDFL* 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2361 884 Pfam Rx N-terminal domain 6 90 IPR041118 -
Gso18g2361 884 CDD RX-CC_like 2 124 IPR038005 -
Gso18g2361 884 Gene3D - 138 315 IPR027417 -
Gso18g2361 884 Gene3D - 6 118 - -
Gso18g2361 884 SUPERFAMILY L domain-like 490 848 - -
Gso18g2361 884 Gene3D - 411 501 IPR036388 -
Gso18g2361 884 PANTHER - 45 875 - -
Gso18g2361 884 Coils Coil 135 155 - -
Gso18g2361 884 PRINTS Disease resistance protein signature 180 195 - -
Gso18g2361 884 PRINTS Disease resistance protein signature 265 279 - -
Gso18g2361 884 PRINTS Disease resistance protein signature 358 372 - -
Gso18g2361 884 PRINTS Disease resistance protein signature 814 830 - -
Gso18g2361 884 Gene3D Ribonuclease Inhibitor 550 881 IPR032675 -
Gso18g2361 884 PANTHER DISEASE RESISTANCE PROTEIN RP 45 875 IPR044974 GO:0006952
Gso18g2361 884 Gene3D - 323 410 IPR042197 -
Gso18g2361 884 Pfam NB-ARC domain 166 394 IPR002182 GO:0043531
Gso18g2361 884 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 420 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2361 Gso-Chr18 56428040 56431533 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2361 178 498 WRKY Transcription Factor Family AT5G45050 25.538 2.85e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2361 - - gmx:100499631 1160.59