Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2351 ATGGAGATAACCTACGCATCCCCTAGCTTCTCCGACCTCCGCGCCATGCCGTCGTCGGCGACCGCCGCGCGTCCCGTCAGGATCATTCCCCTGCAGCACCCGACCGCCACGACGTCGTCGCCGCAGCCGAACGCCGCCTTCTCGCGCTGGACGGCGAAGCTCCGGCGAATGACGTGGCTGGAGTGGATTGAATTCTTCCTCCCTTGCCTCCGCTGGATTCGCATCTACAACTGGCGCGAGTATTTCCAGGTCGATCTCATGGCCGGAATCACCGTCGGCGTCATGCTCGTTCCTCAGTCGATGTCGTATGCGAAATTGGCTGGACTTCAACCGATATATGGACTCTACTCTGGTTTTGTGCCCCTATTTGTATATGCCATATTTGGGTCTTCTCGCCAGCTTGCAGTAGGTCCGGTGGCATTGGTTTCTCTCTTGGTCTCTAATGTGCTGGGTAGCATAGCTGATTCATCCACTGAATTATACACAGAGCTGGCAATATTACTGTCCCTTATGGTTGGGATAATGGAGTGTATAATGGGACTCTTGAGGCTTGGATGGCTGATTCGTTTCATTAGCCATTCAGTGATTTCTGGCTTTACAACTGCTTCGGCTATTGTCATTGGTTTATCTCAAGCGAAATACTTCTTGGGGTATGATATAGATGGGAGTAGCAAGATCATTCCAGTAGTTAAGAGTATAATAGCTGGAGCAGATAAGTTTTCATGGCCTCCTTTTGTGATGGGATCCATTATGCTTGCAATACTGCTTGTCATGAAACACCTGGGAAAATCGAGGAAGTACTTGCGATTCTTGAGAGCTGCAGGTCCTCTTACAGCAGTAGTTCTGGGAACAACTTTTGCAAAAATATTTCATCCATCATCAATTTCTTTGGTGGGTGATATACCTCAAGGCCTACCAAAATTTTCTGTTCCAAAATCTTTCGAGTATGCACAGTCCTTAATTCCAACTGCTCTTCTCATAACTGGTGTGGCTATATTGGAATCAGTGGGAATTGCGAAGGCATTAGCTGCAAAGAATGGGTACGAGTTGGATTCAAATCAAGAGTTGTTCGGTCTTGGTGTTTCCAATGTTCTTGGTTCATTTTTTTCAGCATACCCCACAACAGGATCCTTTTCAAGGTCAGCTGTAAATCATGAAAGTGGTGCAAAATCTGGTGTATCTGGGATTGTTTCAGGAATTATAATGACCTGTGCACTTTTGTTTCTAACACCATTATTTGAGTACATACCTCAGTGTACCCTTGCTGCCATTGTGATCTCTGCTGTGATAGGTCTGGTAGATTATGATGAGGCCATTTTTTTGTGGCGTGTAGATAAGAAAGATTTTCTTCTTTGGACCATTACTAGCACTACAACATTGTTCCTTGGTATTGAGATTGGGGTCCTTGTTGGGGTTGGGGTTTCACTTGCGTTTGTCATTCATGAGTCTGCAAATCCACATATTGCTGTTTTGGGTCGTTTGCCAGGGACAACTGTTTATAGGAATGTTAAACAGTATCCTGAAGCATATACATACAATGGAATTGTAATCGTTCGTGTTGATGCTCCAATTTATTTTGCAAACACAAGTTACATCAAGGACAGGTTGCGTGAATATGAAGTTGATGTTGATCGTTCTAAAAGACGTGGACCTGAGGTTGAAAGAATTTATTTCGTGATTCTAGAGATGGCACCTGTGACATACATAGATTCTAGTGCTGTTCAGGCTTTGAAAGACTTGTATCAGGAGTACAAATTACGGGACATTCAGATTGCAATATCCAATCCAAGTCCAGAAGTTCTGCTTACCTTGTCTAGATCGGGTCTGGTGGAGTTGATAGGCAAAGAATGGTACTTTGTGAGAGTACATGATGCTGTTCAAGTTTGCTTGCAACATGTTCAAAGCTTGAAAGGAGCATCTAACAGTCCACAAGCACCATTCTCTTCAGTAGAGAACAAACCAAGTTTGTTTGCACGATTATCAAAAGAGAGAGTGGAGAAGCTTTCAATTACCGACTTGGAGTCTGGTAATGGCAGGCCTCCACTCCCCGAGGAGAGAGATTCCAAATTGGAGCCATTGTTGTCTAAAGATCATTGA 2097 0.4459 MEITYASPSFSDLRAMPSSATAARPVRIIPLQHPTATTSSPQPNAAFSRWTAKLRRMTWLEWIEFFLPCLRWIRIYNWREYFQVDLMAGITVGVMLVPQSMSYAKLAGLQPIYGLYSGFVPLFVYAIFGSSRQLAVGPVALVSLLVSNVLGSIADSSTELYTELAILLSLMVGIMECIMGLLRLGWLIRFISHSVISGFTTASAIVIGLSQAKYFLGYDIDGSSKIIPVVKSIIAGADKFSWPPFVMGSIMLAILLVMKHLGKSRKYLRFLRAAGPLTAVVLGTTFAKIFHPSSISLVGDIPQGLPKFSVPKSFEYAQSLIPTALLITGVAILESVGIAKALAAKNGYELDSNQELFGLGVSNVLGSFFSAYPTTGSFSRSAVNHESGAKSGVSGIVSGIIMTCALLFLTPLFEYIPQCTLAAIVISAVIGLVDYDEAIFLWRVDKKDFLLWTITSTTTLFLGIEIGVLVGVGVSLAFVIHESANPHIAVLGRLPGTTVYRNVKQYPEAYTYNGIVIVRVDAPIYFANTSYIKDRLREYEVDVDRSKRRGPEVERIYFVILEMAPVTYIDSSAVQALKDLYQEYKLRDIQIAISNPSPEVLLTLSRSGLVELIGKEWYFVRVHDAVQVCLQHVQSLKGASNSPQAPFSSVENKPSLFARLSKERVEKLSITDLESGNGRPPLPEERDSKLEPLLSKDH* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2351 698 CDD STAS_SulP_like_sulfate_transporter 506 622 - -
Gso18g2351 698 ProSitePatterns SLC26A transporters signature. 111 132 IPR018045 GO:0008271|GO:0008272
Gso18g2351 698 PANTHER SULFATE TRANSPORTER 4.1-RELATED 37 664 - -
Gso18g2351 698 PANTHER SULFATE TRANSPORTER 37 664 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gso18g2351 698 MobiDBLite consensus disorder prediction 679 698 - -
Gso18g2351 698 TIGRFAM sulP: sulfate permease 68 625 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gso18g2351 698 Pfam STAS domain 506 625 IPR002645 -
Gso18g2351 698 SUPERFAMILY SpoIIaa-like 507 629 IPR036513 -
Gso18g2351 698 Pfam Sulfate permease family 82 455 IPR011547 GO:0016021
Gso18g2351 698 ProSiteProfiles STAS domain profile. 505 629 IPR002645 -
Gso18g2351 698 MobiDBLite consensus disorder prediction 669 698 - -
Gso18g2351 698 Gene3D STAS domain 485 633 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2351 Gso-Chr18 56336444 56344523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2351 3 635 Inorganic Solute Cotransporters AT5G13550 74.769 0.0 981
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2351 K18059 - gmx:100775789 1333.16