Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2347 ATGGAGTCCAAACAAGAAGCATCAAGTGTTATTTTAAACTTGATGGGTCTTGATAAAGTACCTACCCAACATCCCGTTAGAGATAAACAGAAAGTGCTCTCTGAGAATTACCTGCAGAAAGTTGCCTCTATTGGTGTCAGAAAGAAGCGTTCATCTTATCAGCATCATTCCTCTGGAATGAATACTAATGAAAAGGATGAATCGGAGGATGTTTTGAAAGTGGTTAAAGCACTAAGGCGAGGTAAGCAACATAACCCATCAAAGGGAAATGGGAAAGAGAATCCTAGTTCTTGCAAAAATTCTCATTTCCCTGATGGGCTGCTCCAAGAGATGTTTTATCCTAAAAGCATGAAACCATATCCTGAAATGAGGGAGAGAAAGAAAATATCATATCACATGAATTCTGATAAGCAGAGTTCAAGGCCTTTGAGTAAAATTTCAGAGGAGATTTCTATGCCATCGGGAAATGTTGCAAATGGAGTTTTAGGTACTGCTTCAAGTTCGTTTTTCAGAGGGAATGAAGCATTTTCCAATGATAATATGCTGAAGCCTGCTTCAAATATTTCAGTTAATGAGATCCAATGCAATTCCCCTTTCCTCTGTTCTGATACCAGGACCAACACTTTGGCACAGGGGGATGCGACTGAAAAATTGCAAGAACTTGGACGGTGTGGTCAAGACTGTATACATAACCAGTTGCCTATGATTTCTGAACATGGAAATAGAGCAGGAAATTTGAATCGTCGAAGTGGTTATAGCTATGATAAAATTATAAGGAACATTAGATTCAAGGCTGGTGTTAACTATAGCTTTTCCAGAAGAGTGGCAATACCTCTTTGTACAGCTTCAGTTATTGCTGATAACTGTGGAACTATGAATCAGGATATCTTGTTTCAGAGATATTGGGGTTTGAGAAAGAATGCATCTGCAAATCGATTATCATGGAAGTCAAAGAATCAAAATATTAACCAGAAAGAATGTTTGGAAGATGTGAACCTCAGTCCTGGCCATGAGAAATTCCCTTCTCTTTCCTCTTATTTCAATAGTAATCACACTGAAGAGAATTCTACAGGCCATACATCAGAGAAGAGACGTTATGGGAGCAATTTGTCTGATAAGGTAACTATGCCTCCTCAATTGTCAAGTTCTAGTCCTTCTTCCGCCTTGATAGACTGTCAGATCTTGCAAGAGAGATGCTCAGCAAATGATGAAGTGAGGAACAAAACATATGAAGACAGCAGTATGTCTAAGCAACATGTTGTGTCTCCTGATTCATCAGTTGAATTCTTGGCATCTGATGCAACAAATGAGGTTGTTGGCAGGTCACATAATAATCCAACCAAGCGTCAATACAAGTCAGCAGCCTTCATTTTGTCACAAGAAATTGATTCTCTGAGTCACACATATGCTTCAAAGAAACAGTTACAGGATACATCAGACTTTCAAGAAGATTCCGTTCATTCACTTTGCTCTGAGGCTGATCCAGATTCCATAGGTAGCTTTGAGGAGGCATACGAACCTAGTCCAATTTCAGTTTTGGATCCCTTATTTGGTGAAGACAGCTCTAAATGTGGCAATCATGTATATGATTCCTCTGAAGTGGATGATGAAGAATATGGTTTGAATGTTTCAAGTGATGAAGATTGTGAGAATGAATCTGTAGGTGACTCCGAAGAAAAGAAAGATGTAGCAGGATTATTTAGAGCTGAAGAAAGTAGGGATTTCTCGTATATTGTTGAGGTCTTAACCGAGGCAGGTATAAGTAATAGGAGCTTGTTTACAGACTTTTCAACATGGCACTCTGCAGAATGTCCTATTAGCCCTTCTGTCTTCAAAATCCTGGAAAAAAAATTTGGCGAGCAGCAACTTTGGAAGAGATCTGAAAGGAAACTTCTCTTTGATTGCATTAACCTAGGGCTGCTAGAGATTCTGCAGCCATATTTGTACATCCCGGTGTGGGAAAAGCCCATGTCAAGAAGGTTGAATACTGAACCAAGCCAGGACATGATTGAGGAGGAGATGTGGGGGTTGCTTGTTGCACAGGAAAAGAAAGCTAGTAAAGGGTTAGCAGACAGTATGCTCGAAGGGGAGATTAGGTGGATAGAACTAGTTGAAGATGTTGAAGATATTGTTAGAGAGATAGTGAAGTTGTTAATAGAGGAGCTCACAAACGAGATAGTTAGCTTGGAGAATTTTTGA 2199 0.3956 MESKQEASSVILNLMGLDKVPTQHPVRDKQKVLSENYLQKVASIGVRKKRSSYQHHSSGMNTNEKDESEDVLKVVKALRRGKQHNPSKGNGKENPSSCKNSHFPDGLLQEMFYPKSMKPYPEMRERKKISYHMNSDKQSSRPLSKISEEISMPSGNVANGVLGTASSSFFRGNEAFSNDNMLKPASNISVNEIQCNSPFLCSDTRTNTLAQGDATEKLQELGRCGQDCIHNQLPMISEHGNRAGNLNRRSGYSYDKIIRNIRFKAGVNYSFSRRVAIPLCTASVIADNCGTMNQDILFQRYWGLRKNASANRLSWKSKNQNINQKECLEDVNLSPGHEKFPSLSSYFNSNHTEENSTGHTSEKRRYGSNLSDKVTMPPQLSSSSPSSALIDCQILQERCSANDEVRNKTYEDSSMSKQHVVSPDSSVEFLASDATNEVVGRSHNNPTKRQYKSAAFILSQEIDSLSHTYASKKQLQDTSDFQEDSVHSLCSEADPDSIGSFEEAYEPSPISVLDPLFGEDSSKCGNHVYDSSEVDDEEYGLNVSSDEDCENESVGDSEEKKDVAGLFRAEESRDFSYIVEVLTEAGISNRSLFTDFSTWHSAECPISPSVFKILEKKFGEQQLWKRSERKLLFDCINLGLLEILQPYLYIPVWEKPMSRRLNTEPSQDMIEEEMWGLLVAQEKKASKGLADSMLEGEIRWIELVEDVEDIVREIVKLLIEELTNEIVSLENF* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2347 732 MobiDBLite consensus disorder prediction 372 387 - -
Gso18g2347 732 Pfam Domain of unknown function (DUF4378) 574 725 IPR025486 -
Gso18g2347 732 PANTHER DUF4378 DOMAIN PROTEIN 86 732 - -
Gso18g2347 732 PANTHER DUF4378 DOMAIN PROTEIN 1 83 - -
Gso18g2347 732 MobiDBLite consensus disorder prediction 88 103 - -
Gso18g2347 732 MobiDBLite consensus disorder prediction 60 77 - -
Gso18g2347 732 MobiDBLite consensus disorder prediction 344 387 - -
Gso18g2347 732 MobiDBLite consensus disorder prediction 45 104 - -
Gso18g2347 732 PANTHER AFADIN 86 732 - -
Gso18g2347 732 PANTHER AFADIN 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2347 Gso-Chr18 56305227 56310417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2347 490 729 TRM (TON1 Recruiting Motif) Superfamily AT2G39435 33.840 1.21e-36 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2347 - - gmx:100796503 1437.94