Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2334 ATGGCTTCAATCTCTCACTTCAGAACCTCCGCGAATTCCTTCCTCTCCCAATACGAACCTCTCTCTCTGCTTCTCGCTCCTCTCCTCTCTCTCCTCTTCGCTCACGCTCTCCGCTCCTTCTTCCACCTCCTCTCCCAGAACGGACTCAAAGCCACGCTCCTAGGGTTTCTCATTAACTCCCTCAAATTGGTCCCTGGCGTGAAGGGATACATAGATGCCGAAAAACAAAAGGTTGTGGATAAGTTGCAATCTGATGGTAAATCTAAAAGAGAAGGTTGGAAAACTGAGTTGCCAAGCACAGGATTAGGGACATCTGTCCTTGAGAAAATGAGAGAGGAGAAAATAAATGATGCGGTTTGGCAAGGCAAATGCTCTGGTACAGTCTACATTGGAGGAAGTGAATCTGATGGACATTTTTCTCTGATAAATGAGGCATGTTCAATGTTTGCTCATACCAATCCCCTGCATTTGGATGTTTTCAAGAGTGTTGCACGCTTTGAGGCAGAAGTGGTTGCAATGACAGCAGCACTTCTTGGAAGTAAGGAAAAGAGTTCTGGACGACAAATATGTGGCAACATGACGTCAGGCGGGACTGAAAGTATATTATTAGCTGTCAAGTCGTCTCGTGACTATATGAAATCTAAGAAAGGAATTACAAGACCTGAAATGATTATTCCCGAGTCTGGGCACTCGGCATATGACAAGGCTGCACAGTATTTTAATATCAAACTATGGCGTGTACCAGTTAACAAGAATTTCCAAGCTGATGTGAAAGCGATTCGACGTCATATTAACAAAAATACCATCTTGATTGTTGGATCTGCTCCAGGGTTTCCTCATGGAGTAATTGACCCCATTGAAGAACTTGGTCATCTGGCATCAAGCTTTGGTATTTGTTTCCATGTGGACCTTTGCCTTGGTGGCTTTGTATTACCATTTGCTCGTGAGCTTGGGTACCACATTCCACCTTTTGATTTTTCTGTTAAAGGGGTTTCTTCAATATCAGTGGATGTACATAAATATGGTTTAGCTCCCAAAGGAACTAGCGTAGTTCTTTACAGAAACCATGAAATCAGAAAGCATCAATTTGTTGCTGTTACCGAGTGGTCTGGTGGGCTGTATGTATCTCCAACCATAGCTGGAAGCAGGCCTGGAAGTCTTATTGCCGGTGCATGGGCAGCGATGATATCTCTAGGGAAAGAAGGTTACTTGAAAAATACAAAAGAAATTATGGAAGGGTCAAGAAGAATACAGCAAGGCATAGAGGAGATTGCTGAGTTGTTTATTGTTGGAAAACCCGACATGACGATAGTGGCTTTTGGATCCGACGTTCTAGATATATTCGAAGTCAATGATGTTATGTCATCCAAAGGGTGGCATTTGAATGCATTACAGCGACCCAACAGCATCCATATCTGTGTGACACTGCAACATGTGCCAATTGTTGAAGACTTTCTCAATGATCTGAAGGAATCTGTGAAAACTGTGAAAGCAAATCCAGGTCCAATAAGTGGAGGCCTAGCACCTATATATGGCGCCGCAGGGAAGATGCCAGATAGAGGCATGGTCCAGGAATTGCTGGTAGATTATATGGACGGTACCTGCTAA 1608 0.4366 MASISHFRTSANSFLSQYEPLSLLLAPLLSLLFAHALRSFFHLLSQNGLKATLLGFLINSLKLVPGVKGYIDAEKQKVVDKLQSDGKSKREGWKTELPSTGLGTSVLEKMREEKINDAVWQGKCSGTVYIGGSESDGHFSLINEACSMFAHTNPLHLDVFKSVARFEAEVVAMTAALLGSKEKSSGRQICGNMTSGGTESILLAVKSSRDYMKSKKGITRPEMIIPESGHSAYDKAAQYFNIKLWRVPVNKNFQADVKAIRRHINKNTILIVGSAPGFPHGVIDPIEELGHLASSFGICFHVDLCLGGFVLPFARELGYHIPPFDFSVKGVSSISVDVHKYGLAPKGTSVVLYRNHEIRKHQFVAVTEWSGGLYVSPTIAGSRPGSLIAGAWAAMISLGKEGYLKNTKEIMEGSRRIQQGIEEIAELFIVGKPDMTIVAFGSDVLDIFEVNDVMSSKGWHLNALQRPNSIHICVTLQHVPIVEDFLNDLKESVKTVKANPGPISGGLAPIYGAAGKMPDRGMVQELLVDYMDGTC* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2334 535 SUPERFAMILY PLP-dependent transferases 73 499 IPR015424 -
Gso18g2334 535 Gene3D Aspartate Aminotransferase, domain 1 104 498 IPR015422 GO:0003824
Gso18g2334 535 Gene3D - 132 399 IPR015421 GO:0003824
Gso18g2334 535 Gene3D - 95 532 - -
Gso18g2334 535 PANTHER SPHINGOSINE-1-PHOSPHATE LYASE 1 15 535 - -
Gso18g2334 535 PANTHER - 15 535 - -
Gso18g2334 535 Pfam Pyridoxal-dependent decarboxylase conserved domain 151 440 IPR002129 GO:0016830|GO:0019752|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2334 Gso-Chr18 56209029 56215877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2334 151 495 Calmodulin-binding Proteins AT3G17760 26.776 2.48e-24 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2334 K01634 - gmx:100794395 1042.34