Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2324 ATGACTCAGGCGGTGGAGGTGCTGAATCGGTATGGGACGGATCTGGTGGGGGAGCCGAGAGGTTCTGATTCTGAGTGTTTGGCGGGTTTTGAGTGTTTTCTGAACATTGTGAGGGCATTGGGAATGGGATCGTGCATCTCGGAGGTTGGAGCTGGTGGAAGTTCCCCTCCTCTTCTTCCTTTTTCGCCTGAATCGAACATGGATGGTGGGAAGAGGAGAAGGTTAAGGGGTTCCTCTTCCTTTGATTTCAAAGTGCCTGGGAGGATGTTCTTGAATGGGTCAAGCGAGGTTGCATCCATGTATTGCAAGCAAGGAAGAAAAGGGATCAACCAAGATGCTATGCTTGTTTGGGAGAACTTTTGTTCAAAGGAAGACACCATTTTTTGTGGTGTTTTTGATGGACATGGACCTTATGGCCACAGGGTTGCAAAGAAAGTTAGGGATTCTTTTCCTTTAAAGCTTAATGCCCAATGGGATTTGCATCATAAGAATAGAGATGGACTCAGTGATCATAGCAGCGCCACAGGAAGTTATAAATCTGAAGGGAATGGATTTAGACTGGTGGATGAGAAAACTAGTCCCACTGATCATGAACTTGATGAAACAGATACGATTTTGACATTACGAGAATCATTTTTGAAGGCTTGTAAGATTATGGATAAAGAACTGAAACATCATCCTGATATTGACTGCTTTTGTAGTGGGACTACAGCAGTTACTTTGGTCAAGCAGGGGCTGGACCTTGTTATTGGAAATGTTGGTGACTCGAGAGCTGTATTGGGTACCCGAGATCATGAGGATTCCCTTATTGCTGTTCAGTTGACCGTTGACCTTAAGCCAAATCTTCCAAGGGAAGAAGAGAGGATCAAGCTTCGTAGAGGAAGGGTTTTTTCCCTTCAGAATGAACCTGATGTGGCTCGAGTTTGGCTGCCTAACTCTGATTTCCCTGGTCTTGCTATGGCTCGGGCATTTGGAGATTTTTGCCTTAAGGACTTTGGATTGATTGCTGTTCCAGATATCTCATATCACCGCCTTACCGAGAAGGATGAATTTGTTGTGTTAGCAACAGATGGGATTTGGGATGTTCTGTCAAATGAAGAAGTTGTGGACATTGTGGCATCTGCTTCACAGTCTACTGCTGCTAGAGCACTGGTTGAGTCAGCTGTTCGGGCATGGAAGACAAAATTTCCTTTTTGTAAGGTTGATGATTGTGCCGCAGTTTGCCTCTTCTTTGATTCTGATTTAGATTTCAAGTCAACAGATACAAAAGACAAGTTAATACCGGAGGCATCTATTGACCAATCTGAGCAGTTAGCTTTACTTGGTGAAAAGGGAGTTGGAAATGAAGCTGAAAAAAAGCAGCAATAG 1368 0.4408 MTQAVEVLNRYGTDLVGEPRGSDSECLAGFECFLNIVRALGMGSCISEVGAGGSSPPLLPFSPESNMDGGKRRRLRGSSSFDFKVPGRMFLNGSSEVASMYCKQGRKGINQDAMLVWENFCSKEDTIFCGVFDGHGPYGHRVAKKVRDSFPLKLNAQWDLHHKNRDGLSDHSSATGSYKSEGNGFRLVDEKTSPTDHELDETDTILTLRESFLKACKIMDKELKHHPDIDCFCSGTTAVTLVKQGLDLVIGNVGDSRAVLGTRDHEDSLIAVQLTVDLKPNLPREEERIKLRRGRVFSLQNEPDVARVWLPNSDFPGLAMARAFGDFCLKDFGLIAVPDISYHRLTEKDEFVVLATDGIWDVLSNEEVVDIVASASQSTAARALVESAVRAWKTKFPFCKVDDCAAVCLFFDSDLDFKSTDTKDKLIPEASIDQSEQLALLGEKGVGNEAEKKQQ* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2324 455 CDD PP2Cc 97 411 IPR001932 -
Gso18g2324 455 Pfam Protein phosphatase 2C 182 390 IPR001932 -
Gso18g2324 455 PANTHER ALPHABET, ISOFORM E-RELATED 42 419 - -
Gso18g2324 455 SUPERFAMILY PP2C-like 94 412 IPR036457 -
Gso18g2324 455 MobiDBLite consensus disorder prediction 184 198 - -
Gso18g2324 455 SMART PP2C_4 91 409 IPR001932 -
Gso18g2324 455 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 42 419 - -
Gso18g2324 455 MobiDBLite consensus disorder prediction 165 198 - -
Gso18g2324 455 Gene3D - 92 419 IPR036457 -
Gso18g2324 455 ProSiteProfiles PPM-type phosphatase domain profile. 97 411 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2324 Gso-Chr18 56128386 56133100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2324 70 412 PP2C-type Phosphatase Gene Family AT1G16220 58.708 3.30e-146 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2324 - - gmx:100810538 903.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2324 18 56128386 56133100 Gso8g2143 8 23584480 23589610 GST