Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2323 ATGGCAGATAGTGTTGTTGCTTTTCTGCTAGATAACTTGTCTCGGCTGCTTGAAGATGAGCACAAGTTGCTTTCTGGCGTGGAGGACAAAGTCAACTCTCTTTGCAATGAGCTCAAGTTTATACACATCTTCCTCAAGAATTCCGAGGGCAAGCGCAGTCATGACACAGTGAAAGAAGTGGTGAGCCAAATCAGAGATGTCGCCCACAAAGCTGAAGATGTTGTTGACACCTACGTTGCCAACATCACCAAGCACAGACAGAGAAACATACTTAGCAAGTTATTCCACCTCAGAGAACAAGTCATGGTGCTTCACCAAGTCAACTCTGACATAGAGAAGATCAGGACTCGGATCGATGAGATCTATAAGAATAGGGACAGATATGGCATTGGAGAAGGTGAATTCCGAAGCGAAGAAGCTGCTGCAGAAGCAGAACCACTCCTCAAAAGAAGGAGGGAGGTGGAGGAAGAAGATGTGGTGGGCTTAGTGCATGACTCAAGCCATGTAATTCAGGAACTCATGGAGAGTGAGTCACGTCTTAAAGTTGTTTCCATAATTGGAATGGGAGGGTTGGGTAAGACCACTCTTGCCCGTAAGATCTATAACAACAATCAAGTGCAGCTGTGGTTTCCTTGCCTTGCATGGGTTTCTGTGTCCAACGATTACAGACCCAAGGAATTTCTTCTCAGCCTTCTCAAATGTTCAATGTCATCCACATCCGAATTTGAAGAATTAAGTGAGGCAGAACTGAAGAAGAAGGTAGCAGAATGGTTGAAAGGGAAGAAGTATCTGGTAGTGCTTGATGACATCTGGGAAACCCAAGTATGGGATGAGGTTAAAGGAGCCTTTCCAGATGACCAATCAGGTAGTAGAATTCTCATAACAAGTCGCAACAAAGAGGTGGCACACTATGCTGGAACTGCGTCTCCCTACTACCTTCCCATCCTCAATGAAGATGAAAGCTGGGAACTCTTCACAAAGAAGATTTTTCGAGGTGAAGAATGCCCGTCTGATTTAGAGCCTCTGGGTAGATCCATTGTGAAAACTTGTGGGGGTTTACCACTTGCCATTGTGGTTTTAGCAGGACTCGTTGCCAAGAAGGAGAAGTCACAAAGAGAGTGGTCAAGAATCAAGGATGTGAGTTGGCATCTTACAGAGGATAAGACTGGAGTGATGGATATACTGAAGCTTAGCTATAACAACTTGCCTGGAAGATTAAAGCCTTGTTTTCTGTATTTTGGAATCTATCCTGAAGACTATGAGATCAGTGCAAGGAAATTGATCCAATATTGGATCGCAGAAGGGTTCATACAACCACAAAAAACTGGAATTGCAGATACAACAGAACTGGAAGATGTAGCTGACTTTTACTTGGATGAGCTGGTGGATCGCAGCTTGGTGCAAGTGGCAAAAAGGAGGAGTGATGGGGGTGTCAAGACATGTCGGATTCATGATATTCTACGTGATCTTTGCTTGTCAGAAAGCAAGTCTGATAAGTTTCTGGAGGTTTGCACAAACTCCAACATTGATACCATCAGTAATACCAATCCCCGTAGAATGTCCATCCACTGGAAAGGAGACTGGGATGTCTCTGCAAACACATTTAACAAATCATGCACTCGTTCCATATTCATCTTTGGTAGTGATGATAGAATGGACCTAATTCCTGTTTTGAAATACTTCGAGTTGGCCCGTGTGCTTGATTGTGATTATTCGATTTTTGGGTTTTTGCCTTATTCAGTCCCCAGAGATTTGAAGAGGATGATCCATCTAAGATACTTGAGAATATGGGTCAAGCACCTTCCAGATTGTGTATGCAGCCTTTGGAATCTAGAAACACTGGATGTAAGATATAGAGGGACAGTATCCAGTAAAATTTGGACGTTGAAGCGACTGAGACATCTTTATTTGAAGGGGAAAGGGAAGTTACCACTGCCAAAAGCAAATAGAATGGAGAATCTCCAAACCCTTTCGTTATTGGATCAGTATCCACAACAAATTATTTTCCTGTTGAACAGTGGCATATTTCCTAGGTTGCGAAAATTAGGTTTGAGCTGTTATGATTTAGACGGAGAATCAAGTATGTTACCAAGTCTACAGCGCCTCAGCAATCTTCATAGCCTAAATCTAAAGCCCAGTTATCCAAAGTACGGTTTTGAACTTCTATTAGACACCAATGCGTTTCCATCAAATCTTACAAAGATAACCTTGGATGTAGATGCATTCCCTGATCTCCAATCTTTAATGAAGACACTAGGGCGACTTCCCAACCTTCAAATCTTGAAACTAAGATTCGGCCATGTTGGTTTTCATCTTGATATTGGCAGGGGAGAGTTCCCGCAACTTCAAGTGCTTCATATGGATCGAATAAAAGTAAGACAATGGAGATTAGAGAAAGATGCAATGCCTCGACTTCGCCATCTGGTCATTAATGGCTGTTCTAAATTGTCAGAGCTTCCAGAAGAACTTTGGTCAATGACTGCCTTACGACTGGTGCATGTTTCACGGCCCTCCGAAGAATTGGCTAACAGTCTCAAAAATGTGGAGCCCAGGAATGGCTGTAAGCTCATAATCTCTAATGCTCCAGAACTGTGGACAGGCAAGTGGGACCGCTTTCTCTCATAA 2625 0.4305 MADSVVAFLLDNLSRLLEDEHKLLSGVEDKVNSLCNELKFIHIFLKNSEGKRSHDTVKEVVSQIRDVAHKAEDVVDTYVANITKHRQRNILSKLFHLREQVMVLHQVNSDIEKIRTRIDEIYKNRDRYGIGEGEFRSEEAAAEAEPLLKRRREVEEEDVVGLVHDSSHVIQELMESESRLKVVSIIGMGGLGKTTLARKIYNNNQVQLWFPCLAWVSVSNDYRPKEFLLSLLKCSMSSTSEFEELSEAELKKKVAEWLKGKKYLVVLDDIWETQVWDEVKGAFPDDQSGSRILITSRNKEVAHYAGTASPYYLPILNEDESWELFTKKIFRGEECPSDLEPLGRSIVKTCGGLPLAIVVLAGLVAKKEKSQREWSRIKDVSWHLTEDKTGVMDILKLSYNNLPGRLKPCFLYFGIYPEDYEISARKLIQYWIAEGFIQPQKTGIADTTELEDVADFYLDELVDRSLVQVAKRRSDGGVKTCRIHDILRDLCLSESKSDKFLEVCTNSNIDTISNTNPRRMSIHWKGDWDVSANTFNKSCTRSIFIFGSDDRMDLIPVLKYFELARVLDCDYSIFGFLPYSVPRDLKRMIHLRYLRIWVKHLPDCVCSLWNLETLDVRYRGTVSSKIWTLKRLRHLYLKGKGKLPLPKANRMENLQTLSLLDQYPQQIIFLLNSGIFPRLRKLGLSCYDLDGESSMLPSLQRLSNLHSLNLKPSYPKYGFELLLDTNAFPSNLTKITLDVDAFPDLQSLMKTLGRLPNLQILKLRFGHVGFHLDIGRGEFPQLQVLHMDRIKVRQWRLEKDAMPRLRHLVINGCSKLSELPEELWSMTALRLVHVSRPSEELANSLKNVEPRNGCKLIISNAPELWTGKWDRFLS* 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2323 874 Gene3D - 315 403 IPR042197 -
Gso18g2323 874 SUPERFAMILY L domain-like 474 833 - -
Gso18g2323 874 PRINTS Disease resistance protein signature 182 197 - -
Gso18g2323 874 PRINTS Disease resistance protein signature 257 271 - -
Gso18g2323 874 PRINTS Disease resistance protein signature 350 364 - -
Gso18g2323 874 PRINTS Disease resistance protein signature 800 816 - -
Gso18g2323 874 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 413 IPR027417 -
Gso18g2323 874 PANTHER DISEASE RESISTANCE PROTEIN RP 44 858 IPR044974 GO:0006952
Gso18g2323 874 Pfam Rx N-terminal domain 5 88 IPR041118 -
Gso18g2323 874 PANTHER - 44 858 - -
Gso18g2323 874 CDD RX-CC_like 2 121 IPR038005 -
Gso18g2323 874 Pfam NB-ARC domain 168 401 IPR002182 GO:0043531
Gso18g2323 874 Gene3D - 5 118 - -
Gso18g2323 874 Gene3D - 405 493 IPR036388 -
Gso18g2323 874 Gene3D - 140 309 IPR027417 -
Gso18g2323 874 Gene3D Ribonuclease Inhibitor 563 854 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2323 Gso-Chr18 56122527 56125433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2323 180 490 WRKY Transcription Factor Family AT5G45050 25.000 1.41e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2323 - - gmx:106797945 1419.45