Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2318 ATGACCATGGTTCCTTCTCAAAACGGGAAACAACAACAAAACATTAATAGGAGTGCTATGAACCAGGTTATTGAAGTTGAAGGAGGCTACAATTGCTTGTTAGGATCCGATTTTGTGGCGAGGAGGCACATCATGGCTGAGGCTGAAGAATCATCGAGACACAATAACAACACTAACGAGGAAGCTGAAGTTGGAGCTTGCGGTTCAATCTCAAAGGAGGAGGAAGAAGAAGAAGATGAAGAAGAAGCAAACAACAACAGCAACAACAACAACAACAGTAACTGGCTTCAATTAAGCATAGGTTTGACAAGCACAAAACAAGAGCGTGATACTCGAACCGTTGTTCCAACAACAACAACAACCAGTTCAGGGCTTGTTGAGTTAGACTTGCTTCCTTTACGGCGGAGCTCGGAGCAGCAGCAGCAGCAGCCGCCGCCACCGGCGGTTTTTCCAGTGATGGCTTCAGGGAGAGGAGGAGGTTCTTCTTCTTCTTTGCTTTTTGAGCAGCATCATCGAACGACGTCGTATTCATCTTCTTCTTCCATGTCGACGATGATGTCTATGGCCAGTGGTCCAATTACATCAACCTTTGGTCACCAAGAGATGATGAACTGGGCATTTGGTCCACTACTTCCTCAATATTCAATGCCTATTATGCCCTCTTCTTCATCTTTCACTCCTCTTCCTATTCCTTCTTCTTCTTCCTCTTCTCAAACTTGTTACTCTTCTTTGAGGCCTCATCCCTTAGGATCTTACTTTCCCACAGTACCCTTTCATCATCACTTCCCTTCTTCTTCCTCTTCTGGGTTTGATCAATATGACGTGGCAGCTGGGCCAGGACCAAGCTCCGATAATAATGTCACCGTTCGAGTTGTTGATCCTCCTAGAAGACCTCATTCTGGAATATGGTTTATGTTACAAGCCTCTCCAAACCAAGCGAGAGAACCATTCTTGCCACAAATACCTAAGAACTACCTTAGAATTAAAGACGGAAGGATGACAGTTCGGTTGCTATTGAAGTATCTGGTTAGCAAACTCAGACTGGAAAGCGAATCGGAGATAGAGATAACATGCAGAGGGCAGCAACTTTTACCTTTCTTGACGTTGCAGCATGTGAGGGATAACATTTGGAGTCCGAGGGACACCACCACAAGACCTTTGCTTTCAGATTCCTCAACCACCACAGATCATGTCATGGTGCTCCATTACGGTAGAACCACAAACTGA 1227 0.4515 MTMVPSQNGKQQQNINRSAMNQVIEVEGGYNCLLGSDFVARRHIMAEAEESSRHNNNTNEEAEVGACGSISKEEEEEEDEEEANNNSNNNNNSNWLQLSIGLTSTKQERDTRTVVPTTTTTSSGLVELDLLPLRRSSEQQQQQPPPPAVFPVMASGRGGGSSSSLLFEQHHRTTSYSSSSSMSTMMSMASGPITSTFGHQEMMNWAFGPLLPQYSMPIMPSSSSFTPLPIPSSSSSSQTCYSSLRPHPLGSYFPTVPFHHHFPSSSSSGFDQYDVAAGPGPSSDNNVTVRVVDPPRRPHSGIWFMLQASPNQAREPFLPQIPKNYLRIKDGRMTVRLLLKYLVSKLRLESESEIEITCRGQQLLPFLTLQHVRDNIWSPRDTTTRPLLSDSSTTTDHVMVLHYGRTTN* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2318 408 PANTHER RING FINGER PROTEIN 2 406 - -
Gso18g2318 408 Gene3D - 295 388 - -
Gso18g2318 408 MobiDBLite consensus disorder prediction 85 126 - -
Gso18g2318 408 PANTHER RING FINGER PROTEIN 2 406 IPR044171 GO:0007275
Gso18g2318 408 Coils Coil 70 91 - -
Gso18g2318 408 MobiDBLite consensus disorder prediction 49 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2318 Gso-Chr18 56052758 56062255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2318 315 374 C3H Transcription Factor Family AT3G23060 45.000 5.64e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2318 - - gmx:102664769 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2318 18 56052758 56062255 Gso8g2137 8 23423564 23433130 GST