Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2315 ATGTGTTCTCTACTTTGGAGTTCCATTGCATTGTGTGTAGCACTCCTACTCCTTCAGCTTGGCATTGTGCACCCTTCACCCTCTCACCATAGGATCACTCGCTTACCGGGTCAACCCCATGTTCAGTTTCATCAGTTTTCAGGTTATGTAACCGTTGATGACAAAAACCAGCGTGCACTCTTCTTCTACTTTGCTGAAGCTGAAAAAGATGCACTTTCCAAACCCCTTGTTCTTTGGCTCAATGGAGGGCCTGGTTGTTCTTCTCTTGGAGTTGGTGCATTTTCAGAGAATGGACCATTTAGACCCAAAGGAGAGGGCTTGGTTAGAAACCAATTCAGCTGGAACAAAGAAGCGAATATGCTGTATTTGGAAACGCCAATTGGAGTTGGATTCTCTTACTCAACTGATACTTCCTCTTACGAGGGTGTGAATGATAAAATTACAGCCGGGGATAACTTGGTGTTCTTGCAAAACTGGTTTATGAAGTTCCCAGAATACAGAAACCGAAGTTTGTTCATTGTAGGAGAAAGCTATGCAGGCCATTATGTTCCTCAGCTGGCTGAGCTTATGCTCCGATTCAACAGAAAGGAGAAGTTGTTCAATTTAAAAGGCATTGCTCTTGGTAATCCAGTTCTAGAATTTGCAACAGATTTCAATTCGAGAGCTGAGTTCTTCTGGTCACATGGATTAATTTCAGATACAACGTACAAGATGTTCACTTCTGTTTGTAACTATTCAACATATGTGAGGGAATACTATAATGGTGCTGTTTCTCCTACCTGTTCAAGTGTTATGAGCCAAGTTAGTACGGAAACAAGTAGATTTGTCGACAAATATGATGTGACCCTTGATGTTTGTTTGTCTTCAGTGTTCTCACAAACCAAAGTCCTCAATCCCCAGCAAGTCACAGAAACCATAGATGTATGTGTGGAAGATGAAACAGTGAATTATCTGAACAGGAAAGATGTGCAGTCAGCTTTGCATGCTCATCTTGTTGGAGTCCAAAGATGGTCTGCATGCAGCAATGTCCTGGATTATGAGCTGCGTGACTTGGAGATACCAACAATCACGGTTGTGGGGAAGCTAGTCAAGGAGGGAATACCAGTATTGGTTTACAGTGGTGATCAGGACTCAGTTATCCCACTGACTGGAAGTAGAACATTAGTACATAAATTGGCAAAAGAACTAGGATTGAACACCACTGTGCCATACAGGGTGTGGTTTGAGAAGCAGCAGGTGGGTGGGTGGACTCAAGTTTATGGTAACATCCTTTCATTTGCCACCATCAGGGGAGCATCCCATGAAGCTCCATTTTCACAGCCCGAGAGATCACTTGTGCTGTTCAAGTCCTTCTTAGAAGGAGGACCTCTACCACAAGAGATTTGA 1386 0.4322 MCSLLWSSIALCVALLLLQLGIVHPSPSHHRITRLPGQPHVQFHQFSGYVTVDDKNQRALFFYFAEAEKDALSKPLVLWLNGGPGCSSLGVGAFSENGPFRPKGEGLVRNQFSWNKEANMLYLETPIGVGFSYSTDTSSYEGVNDKITAGDNLVFLQNWFMKFPEYRNRSLFIVGESYAGHYVPQLAELMLRFNRKEKLFNLKGIALGNPVLEFATDFNSRAEFFWSHGLISDTTYKMFTSVCNYSTYVREYYNGAVSPTCSSVMSQVSTETSRFVDKYDVTLDVCLSSVFSQTKVLNPQQVTETIDVCVEDETVNYLNRKDVQSALHAHLVGVQRWSACSNVLDYELRDLEIPTITVVGKLVKEGIPVLVYSGDQDSVIPLTGSRTLVHKLAKELGLNTTVPYRVWFEKQQVGGWTQVYGNILSFATIRGASHEAPFSQPERSLVLFKSFLEGGPLPQEI* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2315 461 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 6 459 IPR001563 GO:0004185|GO:0006508
Gso18g2315 461 SUPERFAMILY alpha/beta-Hydrolases 32 457 IPR029058 -
Gso18g2315 461 Pfam Serine carboxypeptidase 37 454 IPR001563 GO:0004185|GO:0006508
Gso18g2315 461 ProSitePatterns Serine carboxypeptidases, serine active site. 173 180 IPR018202 GO:0004185
Gso18g2315 461 ProSitePatterns Serine carboxypeptidases, histidine active site. 424 441 IPR033124 GO:0004185
Gso18g2315 461 Gene3D - 356 454 - -
Gso18g2315 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 122 IPR001563 GO:0004185|GO:0006508
Gso18g2315 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 133 IPR001563 GO:0004185|GO:0006508
Gso18g2315 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 184 IPR001563 GO:0004185|GO:0006508
Gso18g2315 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 424 437 IPR001563 GO:0004185|GO:0006508
Gso18g2315 461 Gene3D alpha/beta hydrolase 27 288 IPR029058 -
Gso18g2315 461 PANTHER CARBOXYPEPTIDASE 6 459 - -
Gso18g2315 461 Gene3D - 309 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2315 Gso-Chr18 56024990 56028746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2315 317 457 Calmodulin-binding Proteins AT2G22960 26.950 9.58e-14 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2315 K16297 - gmx:100789658 922.154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2315 18 56024990 56028746 Gso8g2133 8 23356953 23360583 GST