Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2314 ATGTTTAGGAAAAGGCACACCCTTTCTTCTCTTGCAAGGGAATTGTTGGCATTTCAGCCACTTTTTCTTCTCTTCTTGTTCAGCTTGCACCACAACACTATGCAGTGTCAAGGAAGGTTGAGTAAACATGTTTCTTCTGAGCCTCCCTCACCTTCTAGGTCAACACCATCACCACCATCTTCATCAGGATACAAGGATGACCCTAGGAAGATAATTTTGAGCATGGTTTTAGGAGCAGTCACTGGACTAGTTTCTTCTGCTCTCTTTGCACTTGTGGTTCGTTGTGTTGTTCAGTATCTGAACCGCACACCAATCCTCAAGGGACCTGTCATATTCTCCCCCAAAATTGCCCCCATGACACTCCAATCAGCTTTGGCAAAGGAAAACCACTTGCTCGGTTCGAGTCCTAATGGGAAGTACTACAAAACTGTGCTTGACAATGGACTCACTATTGCAGTCAAAAGGCTAACACCCTTTGAGAGTAATTCCCCGGAGGCTAAGAGAAAATCAGTGAAGAGGCAGATACAAACTGAGCTTGAGCTTCTTGCAAGCCTTAGGCATAGGAACTTGATGAGTTTAAGGGCCTATGTTCGTGAGCCTGATGGGTTCTCATTGGTTTATGATTATGTTTCCACTGGGAGTCTTGCTGATGTGTTGAGTAAAGTGAGGGAGAATGAGTTGCCCTTTGGTTGGGAAGTTAGGCTCAGGATTGCTGTTGGTGTGGTGAAGGGTCTTCAGTATCTTCATTTCACTTGTGTGCCTCAGATTCTGCACTACAACTTGAAGCCCACAAATGTGATGTTGGATGCTGAGTTTGAACCTAGATTGGCAGATTATGGGTTGGCTAAACTTCTACCCAATTTGGATGGAGGAAGTTCTCTCTACACTCCTCCTGAATGTTTCCATAATTGCAGCAGGTACACTGACAAAAGTGACATCTTTAGTTTTGGCATGATACTAGGTGTTTTGTTAACTGGTAAGGATCCTACAGATCCATTCTTTGGAGAAGCAGCCAGTGGGGGAAGTTTGGGATGTTGGCTGAGACACTTGCAGCAAGCGGGCGAGGCGCACGAAGCTCTAGATAAGAGCATGTTAGGGGAAGAAGGTGAGGAAGATGAGATGCTAATGGCGGTTAGGATTGCTGCTGCATGCCTCTCTGATATGCCTGCAGATAGGCCTTCTAGTGATGAGCTTGTTCACATGCTAACGCAACTGCACAGTTTTTGA 1227 0.4548 MFRKRHTLSSLARELLAFQPLFLLFLFSLHHNTMQCQGRLSKHVSSEPPSPSRSTPSPPSSSGYKDDPRKIILSMVLGAVTGLVSSALFALVVRCVVQYLNRTPILKGPVIFSPKIAPMTLQSALAKENHLLGSSPNGKYYKTVLDNGLTIAVKRLTPFESNSPEAKRKSVKRQIQTELELLASLRHRNLMSLRAYVREPDGFSLVYDYVSTGSLADVLSKVRENELPFGWEVRLRIAVGVVKGLQYLHFTCVPQILHYNLKPTNVMLDAEFEPRLADYGLAKLLPNLDGGSSLYTPPECFHNCSRYTDKSDIFSFGMILGVLLTGKDPTDPFFGEAASGGSLGCWLRHLQQAGEAHEALDKSMLGEEGEEDEMLMAVRIAAACLSDMPADRPSSDELVHMLTQLHSF* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2314 408 Pfam Protein kinase domain 128 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g2314 408 CDD STKc_IRAK 132 405 - -
Gso18g2314 408 Gene3D Transferase(Phosphotransferase) domain 1 210 407 - -
Gso18g2314 408 SUPERFAMILY Protein kinase-like (PK-like) 129 402 IPR011009 -
Gso18g2314 408 ProSiteProfiles Protein kinase domain profile. 126 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g2314 408 Gene3D Phosphorylase Kinase; domain 1 118 209 - -
Gso18g2314 408 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE CORYNE 12 408 - -
Gso18g2314 408 PANTHER - 12 408 - -
Gso18g2314 408 MobiDBLite consensus disorder prediction 40 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2314 Gso-Chr18 56019929 56022922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2314 72 405 Receptor kinase-like Gene Family AT2G31880 35.211 1.74e-64 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Gso18g2314 Pkinase 1.2e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2314 - - gmx:102664172 761.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2314 18 56019929 56022922 Gso8g2132 8 23351037 23353973 GST