Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2312 ATGGCTCTGGACCAGCCTTCGAATCCCAACGCCGTCGATGGCGCTGGTAACGGCGCGACGCCCTGCTCCGCCGCAGACGGCGGCGATGACGGGAGGCCGGCGGCGAGGCTGCCGCGGTGGACGCGACAGGAGATTCTGGTGCTGATTCAGGGAAAGAGCGACGCGGAGAGCCGGTTCAGGCCGGGTCGGGGGAGCGGTTCGGCGTTTGGTTCGGGCGAACCGAAATGGGCGTTGGTGTCATCGTACTGCAAGAAGCACGGCGTGAACCGGGAACCGGTTCAGTGCCGGAAGCGGTGGAGCAACCTCGCCGGCGATTACAAAAAGATCAAGGAGTGGGAGTCGCAGGTGAGGGACGAAGCGGAGTCGTTTTGGCTCATGAGGAACGATTTGAGGAGGGAGAGGAAATTGCCTGGGTATTTTGACAGGGAGGTTTATAATATTCTCGATTCGCCGTCGTCCACGGCAGCGGCTGCAGCGGCGGAGACTCCGGTGGCGGTGGCGGAGGCGGCGTCGGCGGGGGATGAGGAGGTGCACCTCTATGATAGTAATCGGAGGGTTGGGAGTGAGGATGGGTTGTTCTCGGATTCTGAGAAGGACGAGGTTTTGCTTTTAGCCGCTGCCAAGGATGTTCCTGCACCTGTTCCTCTCTCAGAGAAGCAATATCAGCCGCATCTCCATGGGTGTGAAGGGGAAGGCAACCCTCAAGGTACTACCAATGGGAAATGGGCAACCCCAAATCCAGAAATGGGTTCTACATCTCAAGGGGAACGGAAGAGGAAGCGGTTAGCAACAGACGGAGAGGAGGAAACTTTGCAAAGCCAATTAATTGATGTCTTAGAAAAGAATGGCAAAATGCTACATGATCAACTTGAAGCTCAGAACCTGAATTTCCAGTTGGATCGCCAACAGCAGAAAGACACTGCAAGTAACATAGTTGCTGTACTTGATAAGCTTGCAGATGCTCTAGGGAGAATTGCTGATAAATTGTAG 990 0.5576 MALDQPSNPNAVDGAGNGATPCSAADGGDDGRPAARLPRWTRQEILVLIQGKSDAESRFRPGRGSGSAFGSGEPKWALVSSYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWESQVRDEAESFWLMRNDLRRERKLPGYFDREVYNILDSPSSTAAAAAAETPVAVAEAASAGDEEVHLYDSNRRVGSEDGLFSDSEKDEVLLLAAAKDVPAPVPLSEKQYQPHLHGCEGEGNPQGTTNGKWATPNPEMGSTSQGERKRKRLATDGEEETLQSQLIDVLEKNGKMLHDQLEAQNLNFQLDRQQQKDTASNIVAVLDKLADALGRIADKL* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2312 329 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 1 329 - -
Gso18g2312 329 MobiDBLite consensus disorder prediction 232 252 - -
Gso18g2312 329 ProSiteProfiles Myb-like domain profile. 32 103 IPR001005 -
Gso18g2312 329 MobiDBLite consensus disorder prediction 53 74 - -
Gso18g2312 329 CDD GT1 38 110 - -
Gso18g2312 329 Pfam Myb/SANT-like DNA-binding domain 39 126 IPR044822 -
Gso18g2312 329 MobiDBLite consensus disorder prediction 1 38 - -
Gso18g2312 329 MobiDBLite consensus disorder prediction 227 268 - -
Gso18g2312 329 Gene3D - 40 108 - -
Gso18g2312 329 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 1 329 - -
Gso18g2312 329 MobiDBLite consensus disorder prediction 253 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2312 Gso-Chr18 56000121 56004279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2312 39 111 Trihelix Transcription Factor Family AT1G33240 34.247 4.81e-07 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gso18g2312 Myb_DNA-bind_4 2.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2312 - - gmx:100788594 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2312 18 56000121 56004279 Gso8g2130 8 23328839 23332733 GST