Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2297 ATGGATGCGCGTCGTGCTCCACGCGCCGTCATTGACCCTAAGGTCCGTAGGGTCGGGTTCTTCGCTCCACCCGAACCCGACCCGATCTCATTCGAAGTCTCTCCCTCCGCCAACTCCCTCTCGCCGGTAATGATCCCTCCGCCGCGGCATTCGTCGGAGAATCTCGGCCTCCACACTCGTCCCGCCGCGACTTCCCCTTCCGCCCAAGAATCCTTTGCAGCCGGGAGCTATTCCAGCTCGTCGGACTTCTTCCCCGCTCCGATGTCGCCGGCTACGTCGCCTTACTCGAGCAGGATCGTCGGCGGCGATGGAGACTTCTTCGCCGGCGGGAAGGCGGCGTCTTCGTTTCCTCGCGGCGGGTTTGACTTGACGGCGACGATGGCGAGTAGCGTTCCAGCGAGCGAATTAACCACGGTTTCGGTGGTGAATGCTGCTTCCCTTTCGATTGGCGAAAGAAAGAAAGCTGACAAAGGAGGAGGATCAGCAGTGGAAGTGAAAGACCAAGTTCTGAATACTAAACAGCAGAAGAAAGAGAAGACTTCAAAGGCTGAAAGACGAGCTCTTCAAGAAGCTCAACGAGCTGCTAAGGCTGCTGCAAAAGCTGAAGGAAACAAGGCATCTGGAACTCTGGCTTCAGTAAATGTAAAACCAGCTAAAGCTGCAAAGCCCCCACAGAAAGTTGATAATGCTTCGGTTGCAGCCTCTGAGAAGAAAGGGGGTGATCGTCCACCAGAAAAAGATAGAAAGAAAGATGTTCCTCAACCACGTCTGCAATATGATGATAAGAGCAGAGTGGAGAAAGCCAAACGGCGTGCTGTGGTAAAACAAACTGAAGCTAAGAACAGAGTTGAACTGTTCAGACATTTGCCCCAGTATGAACATGGGAGTCAACTCCCAGATCTTGAGGCAAAGTTTTTCCAGCTGGGTCCTGTGCATCCTGCTGTTTATAAGGTTGGTTTGCAGTATCTGTCTGGAGATATATCTGGTGGCAATGCTCGTTGTATTGCTATGCTTCAAGCATTTCAAGAGGCCATTGAAGACTACAGGGTTCCATCCGAGAAGACTCTTGTGAGAGACTTAACAGCAAAAATAAGTAGTTATGTTTCTTTTCTCATCGAGTGTCGACCACTTTCTATCAGCATGGGCAATGCAATTAGATTTCTCAAAAGTCGAATTGCCAAGCTACCTTTGACGCTGTCTGAGTCAGAATCAAAAACCTCTCTTCAATCAGATATTGAGCGTTTTATATATGAGAAAATTATACTTGCCAACAAGGTGATAGTCAAGCATGCTGTTACAAAAATAAGAGATGGTGATGTTCTTCTTACTTATGGGTCTTCATCGGCGGTTGAAATGATACTGTTACATGCACACGGGTTAGGGAAACAGTTTCGAGTTGTAGTGGTAGACTCTCGTCCAAAACTTAGAGGGAAACTTTTGCTTCGTAGGCTAGTGGAGAAAGGTCTTAGCTGTACATACATTCATATAAATGCTGTTTCCTACATAATGAATGAAGTTACTCGAGTCTTTCTGGGTGCTTCATCAGTGTTGTCTAATGGAACAGTTTATTCAGGAGTTGGTACTGCTTGTGTTGCAATGGTTGCCCATGCATTCCATGTCCCTGTTTTAGTATGTTGTGAGGCTTATAAATTTCATGAAAGGGTACAGCATGATTCCATATGCTCAAATGAACTTGGTGATCCAGATGTCATTTCTACGGTTCAGAGTAGAGAGGATGTCAACCACTTGGAAGCTTGGGCCAATACTGAAAATCTGCAACTTCTAAACCTGATCTATGATGCTACACCTTCAGATTACGTTTCCATGATAATCACAGATTATGGCATGGTCCCACCCACAAGTGTACCGGTAATTGTAAGGGAATATAGCAGAGAACAGGTGTGGATATGA 1911 0.4694 MDARRAPRAVIDPKVRRVGFFAPPEPDPISFEVSPSANSLSPVMIPPPRHSSENLGLHTRPAATSPSAQESFAAGSYSSSSDFFPAPMSPATSPYSSRIVGGDGDFFAGGKAASSFPRGGFDLTATMASSVPASELTTVSVVNAASLSIGERKKADKGGGSAVEVKDQVLNTKQQKKEKTSKAERRALQEAQRAAKAAAKAEGNKASGTLASVNVKPAKAAKPPQKVDNASVAASEKKGGDRPPEKDRKKDVPQPRLQYDDKSRVEKAKRRAVVKQTEAKNRVELFRHLPQYEHGSQLPDLEAKFFQLGPVHPAVYKVGLQYLSGDISGGNARCIAMLQAFQEAIEDYRVPSEKTLVRDLTAKISSYVSFLIECRPLSISMGNAIRFLKSRIAKLPLTLSESESKTSLQSDIERFIYEKIILANKVIVKHAVTKIRDGDVLLTYGSSSAVEMILLHAHGLGKQFRVVVVDSRPKLRGKLLLRRLVEKGLSCTYIHINAVSYIMNEVTRVFLGASSVLSNGTVYSGVGTACVAMVAHAFHVPVLVCCEAYKFHERVQHDSICSNELGDPDVISTVQSREDVNHLEAWANTENLQLLNLIYDATPSDYVSMIITDYGMVPPTSVPVIVREYSREQVWI* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2297 636 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 3 636 - -
Gso18g2297 636 PANTHER TRANSLATION INITIATION FACTOR EIF-2B DELTA SUBUNIT 3 636 - -
Gso18g2297 636 MobiDBLite consensus disorder prediction 147 273 - -
Gso18g2297 636 Gene3D - 423 629 IPR042529 -
Gso18g2297 636 MobiDBLite consensus disorder prediction 170 191 - -
Gso18g2297 636 MobiDBLite consensus disorder prediction 238 273 - -
Gso18g2297 636 MobiDBLite consensus disorder prediction 57 87 - -
Gso18g2297 636 Pfam Initiation factor 2 subunit family 327 619 IPR000649 GO:0044237
Gso18g2297 636 MobiDBLite consensus disorder prediction 32 87 - -
Gso18g2297 636 SUPERFAMILY NagB/RpiA/CoA transferase-like 311 629 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2297 Gso-Chr18 55854418 55860547 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2297 1 636 Eukaryotic Initiation Factors Gene Family AT5G38640 66.012 0.0 791
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2297 K03680 - gmx:100785938 1141.72