Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2293 ATGGCTTCAGCAAACCCTTCCCCAAATGCTTCCCCTGTTGCAGTGCCTCCAGCACTTGGTGCTATTTTATCACCACCTCCTTCTTCATCTTCTCCAACAAACACTTCCACCCCACCATCACCTCCCAGTTCTTCTCAGCCTAATCAAACACAAACACAAACACCCAATTCCCCTGCTCCTTCATCTCCTTCTGACCCTTCTGCTCCACCTCCTTCTCCTCCTCAGGCAGTGCCATTAACCCCTCCTCCTTCCATATCACTGTCTCCTCCACCATCATCTACACCACCACCAACTTTGCCCCCTCCATCACCACCTGATTCTCCACCACCATTGCCACCTGCATCTCCAACCCCACCAGTTACAACATCTCCCCCCTCACCACCAGCTACCACATCCCCTCCTCCAGCTGAAACTCCACCTTCCCTTCCAAATTTGTCTCCACCATCTCCACCAGCCGGTTCCCCTCCTCCTCAATCACCTCCCACAACAATTCCACCTCCCTCTCGACCGATTTCGCCATCTCCTCCTCCTCCGGCCAATTTTCCAAGGCCACCAACCACTAGAACTCCTCCAGAGAAAGAAAATCCACCAAAAACTACTCCTTCACATGCATCTCCTCCATCAGTTTCTGAAACTCCTCCTAAACCTCCTTCCTCTGATGTTCCCCCTCCATCCACATTGCCTTCAACTCCTCCTTCAGACCCTTCAGGATCTTCACCTCCAGCTTCTTTGCCTGATCCCCCAACTAATAAAACAGTGGTGGGGGGTCCGAAGGTGTCGCTACCCTCTCTTCCAACTGAGAAACCCACTGCTAGACCTACTAATGATGGTACTAACAGTATGTCTTCAAACAACACACCTTCACATTCTGGAGGGTTGAGCACTGGAGGATCTGTGGCTATTGGAATTGTAGTTGGTTTTATTGTCCTCAGCCTTCTTGTTATGGCTGTGTGGTTTGCACAGAAGAAAAAGAAGAAGGGAACAGGATCAAGAGGTAGTTATGCTGCTCCTTCTCCATTTACCTCATCCCACAATTCAGGTACCTTATTCTTGAGGCCGCAGTCTCCGGCCAACTTTTTAGGTAGTGGCTCTGGTAGTGATTTTGTATATTCTCCATCAGAGCCTGGTGGTGTAAGTAGTTCAAGATCATGGTTCACATATGAAGAACTTATTCAAGCTACAAATGGGTTTTCAGCACAAAATTTGTTGGGAGAAGGTGGATTTGGCTGTGTTTATAAAGGTTTGCTGATAGATGGAAGAGAAGTAGCTGTGAAACAGCTCAAAATTGGTGGTGGGCAAGGGGAACGCGAATTCAGGGCAGAAGTTGAGATTATTAGCCGTGTACATCATCGTCATCTGGTTTCTTTAGTTGGTTACTGTATATCCGAGCATCAGAGATTGCTTGTATATGACTATGTTCCCAACGATACTCTTCATTACCATCTCCACGGTGAAAATAGACCAGTTCTAGATTGGCCTACCAGAGTCAAGGTTGCTGCTGGTGCAGCTCGTGGAATAGCTTACTTGCATGAAGACTGTCATCCACGCATTATTCATCGAGATATTAAGTCATCAAACATCCTACTTGATCTCAACTATGAAGCTCAAGTTTCGGACTTTGGGCTTGCAAAATTGGCATTAGATTCAAATACACATGTAACTACACGTGTAATGGGAACCTTTGGGTACATGGCACCAGAATATGCGACAAGTGGAAAACTTACTGAAAAGTCTGATGTATATTCTTTTGGGGTTGTGCTTTTGGAGCTAATTACAGGTCGGAAGCCTGTAGATGCATCTCAACCAATTGGTGATGAGAGCCTGGTTGAATGGGCTCGACCTCTGTTGACGGAAGCACTTGACAATGAGGACTTTGAAATTTTGGTGGATCCAAGACTGGGGAAGAACTACGATAGAAATGAAATGTTTCGGATGATCGAGGCTGCCGCAGCCTGTGTACGCCACTCATCGGTGAAGAGACCACGCATGAGTCAGGTGGTGAGAGCTTTAGATTCCTTGGATGAGTTTACGGATCTCAATAACGGAATGAAACCGGGACAGAGTTCGGTGTTTGATTCGGCGCAGCAATCTGCACAAATCAGAATGTTTAGGAGGATGGCTTTTGGGAGCCAAGATAGTTCCAGTTTCTTCAATGAGTCTCAGAGTAGCTGGAGGAGTAGAGATCACGACCCAACAACTGTCTTCTCCCAAAATAAAACTGGGCATGGGAACGTTTGA 2238 0.4701 MASANPSPNASPVAVPPALGAILSPPPSSSSPTNTSTPPSPPSSSQPNQTQTQTPNSPAPSSPSDPSAPPPSPPQAVPLTPPPSISLSPPPSSTPPPTLPPPSPPDSPPPLPPASPTPPVTTSPPSPPATTSPPPAETPPSLPNLSPPSPPAGSPPPQSPPTTIPPPSRPISPSPPPPANFPRPPTTRTPPEKENPPKTTPSHASPPSVSETPPKPPSSDVPPPSTLPSTPPSDPSGSSPPASLPDPPTNKTVVGGPKVSLPSLPTEKPTARPTNDGTNSMSSNNTPSHSGGLSTGGSVAIGIVVGFIVLSLLVMAVWFAQKKKKKGTGSRGSYAAPSPFTSSHNSGTLFLRPQSPANFLGSGSGSDFVYSPSEPGGVSSSRSWFTYEELIQATNGFSAQNLLGEGGFGCVYKGLLIDGREVAVKQLKIGGGQGEREFRAEVEIISRVHHRHLVSLVGYCISEHQRLLVYDYVPNDTLHYHLHGENRPVLDWPTRVKVAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDLNYEAQVSDFGLAKLALDSNTHVTTRVMGTFGYMAPEYATSGKLTEKSDVYSFGVVLLELITGRKPVDASQPIGDESLVEWARPLLTEALDNEDFEILVDPRLGKNYDRNEMFRMIEAAAACVRHSSVKRPRMSQVVRALDSLDEFTDLNNGMKPGQSSVFDSAQQSAQIRMFRRMAFGSQDSSSFFNESQSSWRSRDHDPTTVFSQNKTGHGNV* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2293 745 MobiDBLite consensus disorder prediction 1 293 - -
Gso18g2293 745 SUPERFAMILY Protein kinase-like (PK-like) 375 670 IPR011009 -
Gso18g2293 745 ProSitePatterns Protein kinases ATP-binding region signature. 403 425 IPR017441 GO:0005524
Gso18g2293 745 Gene3D Phosphorylase Kinase; domain 1 374 472 - -
Gso18g2293 745 MobiDBLite consensus disorder prediction 267 293 - -
Gso18g2293 745 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 115 719 - -
Gso18g2293 745 ProSiteProfiles Protein kinase domain profile. 397 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g2293 745 MobiDBLite consensus disorder prediction 31 45 - -
Gso18g2293 745 MobiDBLite consensus disorder prediction 327 347 - -
Gso18g2293 745 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK8 115 719 - -
Gso18g2293 745 ProSitePatterns Serine/Threonine protein kinases active-site signature. 517 529 IPR008271 GO:0004672|GO:0006468
Gso18g2293 745 SMART serkin_6 397 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g2293 745 MobiDBLite consensus disorder prediction 719 745 - -
Gso18g2293 745 Gene3D Transferase(Phosphotransferase) domain 1 473 689 - -
Gso18g2293 745 MobiDBLite consensus disorder prediction 59 247 - -
Gso18g2293 745 Pfam Protein tyrosine and serine/threonine kinase 400 670 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2293 Gso-Chr18 55806358 55813398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2293 269 666 Trihelix Transcription Factor Family AT1G68690 64.322 0.0 544
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Gso18g2293 PK_Tyr_Ser-Thr 6.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2293 - - gmx:100784873 1024.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2293 18 55806358 55813398 Gso8g2116 8 23017652 23023575 GST