Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2284 ATGGCCACTCGTGTTATCCCACCAAGAATCCTAAGGAACCTTCGCTACAACACCGCCACAAAGCCCCTCAACTCCTCCCACCCTCCTCTCTCCCCGTCTCTCTCTCCTTCTCTCTGCATCCCAGCTCCCCCGCCGATCTCCGCCGTGCTTCCTCCCTCCGACGACCTCAGCTTCCGCGACGTCGAAAAGCTCTTCTCCTCCGTCCCCACCACCACCCTCCTCCGCTCCACCGCCGTGCTCCACGCCACTGCCCTCGAGCCCATGGTTGACTTCGGCACGTGGCTCATGCGATCCAACCTCATGCAAGTGCCTGGCCTCAGTGACCTCATCCTCGCCACCGTCCGCAACACCTTCTTTGACCACTTCTGCGCCGGCGAGGACGCCACCACCACCGCCGACAGCGTCCGCCACCTCAACAAGGCCGGCCTCCGCGGCATGCTCGTCTACGGCGTCGAAGACGCCAACAACAACGACGCGTGCCACCGCAACTTCAAGGGCTTTCTTCACACCATCGACGTCAGCAGATCGCTTCCCCCTTCTTCGGTGAGCTTTGTGATCGTGAAAATCACTGCAATATGTCCCATGAGCCTGCTTGAAAGAATGAGTGACCTGCTTAGATGGCAGCACAAGGACCCTTCTTTCAGTTTGCCATGGAAGCAAGATTGCTTCCCCATATTCTCCGAGTCAAGCCCTTTGTACCACACAAGCAAGAGACCCGAGCCCCTCACCCGAGAGGAAGAGAGTGACCTTCAACTTGCCATGCAAAGATTCCTTGAGCTTTGTCAAAAGTGTGTGCAAGCCAACATTCCTTTGCTGGTTGATGCAGAACACACTTCTGTTCAGCCTGCTATTGACTACTTCACATACTCCTCTGCCATCTTGCACAACAAAGGTGATAACCCCATTGTGTTTGGGACCATTCAGACCTATCTCAAGGATGCCAAGGAGAGACTGGTGCTGGCAGCAGAGGCTGCAGACAACATGGGAATCCCAATGGGGTTCAAACTTGTGAGGGGTGCTTATATGTCAAGTGAAACAAAATTGGCTGAGTCTTTGGGGTATTCGTCCCCAATTCACAACACCATTGAGGACACTCACAAGTGCTTCAATGACTGCTCTTCTTTCATGCTTGAGAAGGTTGCTAATGGCCCTGGTGGAGTTGTTCTTGCAACTCATAATGTTGAGTCAGGGAAACTGGCTGCTGCAAAAGCACATGAACTAGGGATTGGAAAGGTGAACCACAAGCTTGAATTTGCACAGCTTCATGGAATGTCAGAGGCACTTTCCTTTGGATTGAGCAATGCAGGGTTTCAGGTGAGCAAGTATATGCCATTTGGACCTGTGGAGACTGTTATGCCATATCTTTTGAGAAGGGCTGAGGAGAATAGAGGAATGTTGGCTGCCTCGGGCTTTGACAGGCAACTGATGAGGAAGGAGTTGGGAAGGAGACTAAAAGCTGCTTTCTTTTAA 1470 0.5286 MATRVIPPRILRNLRYNTATKPLNSSHPPLSPSLSPSLCIPAPPPISAVLPPSDDLSFRDVEKLFSSVPTTTLLRSTAVLHATALEPMVDFGTWLMRSNLMQVPGLSDLILATVRNTFFDHFCAGEDATTTADSVRHLNKAGLRGMLVYGVEDANNNDACHRNFKGFLHTIDVSRSLPPSSVSFVIVKITAICPMSLLERMSDLLRWQHKDPSFSLPWKQDCFPIFSESSPLYHTSKRPEPLTREEESDLQLAMQRFLELCQKCVQANIPLLVDAEHTSVQPAIDYFTYSSAILHNKGDNPIVFGTIQTYLKDAKERLVLAAEAADNMGIPMGFKLVRGAYMSSETKLAESLGYSSPIHNTIEDTHKCFNDCSSFMLEKVANGPGGVVLATHNVESGKLAAAKAHELGIGKVNHKLEFAQLHGMSEALSFGLSNAGFQVSKYMPFGPVETVMPYLLRRAEENRGMLAASGFDRQLMRKELGRRLKAAFF* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2284 489 Pfam Proline dehydrogenase 134 465 IPR002872 -
Gso18g2284 489 PANTHER PROLINE OXIDASE 1 487 IPR015659 GO:0004657|GO:0006562
Gso18g2284 489 SUPERFAMILY FAD-linked oxidoreductase 125 486 IPR029041 -
Gso18g2284 489 PANTHER PROLINE DEHYDROGENASE 1 487 - -
Gso18g2284 489 Gene3D - 92 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2284 Gso-Chr18 55720896 55724088 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2284 K00318 - gmx:100799876 935.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2284 18 55720896 55724088 Gso8g2104 8 22883584 22885579 GST
Gso13g0319 13 14563305 14567039 Gso18g2284 18 55720896 55724088 PCT
Gso19g1039 19 38072988 38075425 Gso18g2284 18 55720896 55724088 PCT
Gso18g2284 18 55720896 55724088 Gso13g0319 13 14563305 14567039 PCT
Gso18g2284 18 55720896 55724088 Gso19g1039 19 38072988 38075425 PCT