Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2273 ATGCAGGCCAGGGAGATCACAGGACTCAATTATTTACTCCCTTCAGACCCTTGTCCTTACCCTGGTCACTACAGCATGGTTCAGAACACCATCCCCACATTTCAACTCCACAAACTCTCAAACCAATTCTATGGTTTGCAGAATCCTCCTAAAGTGCTTGCAGACTTCAGCCCCCCTCAGTCCTCATGCATCAGCAGCAACTCAACCTCTGATGAAGCAGATGAGCAGCAGCAAAGCCTCATCAATGAGAGGAAGCACAGGAGGATGATATCGAACCGCGAGTCGGCGCGCCGGTCACGCATGAGGAAGCAGAAACACCTTGATGAACTGTGGTCACAGGTGGTTTGGCTCAGGAATGAAAACCACCAGCTAATGGACAAGCTGAACCATGTGTCTGCGTCACAAGATAAAGTTGTTCAAGAGAATGTTCAGCTGAGAGAAGAAGCCTCAGAACTTCGCCAAATGATATGTGACATGCAGCTACACAGTCCATACCACCCTCCTCCCTTGAGTCCCATTGATGATGATGTTTCTCCCTATGTCAAATCTGATTCCTCAATCACAGACTCTTTGGACCTGCTTGGTTGA 588 0.4847 MQAREITGLNYLLPSDPCPYPGHYSMVQNTIPTFQLHKLSNQFYGLQNPPKVLADFSPPQSSCISSNSTSDEADEQQQSLINERKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLMDKLNHVSASQDKVVQENVQLREEASELRQMICDMQLHSPYHPPPLSPIDDDVSPYVKSDSSITDSLDLLG* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2273 195 MobiDBLite consensus disorder prediction 55 80 - -
Gso18g2273 195 MobiDBLite consensus disorder prediction 55 76 - -
Gso18g2273 195 Gene3D - 82 138 - -
Gso18g2273 195 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 82 145 IPR004827 GO:0003700|GO:0006355
Gso18g2273 195 SUPERFAMILY Leucine zipper domain 84 132 IPR046347 GO:0003700|GO:0006355
Gso18g2273 195 Coils Coil 135 155 - -
Gso18g2273 195 CDD bZIP_plant_GBF1 85 132 IPR045314 GO:0003700|GO:0006355
Gso18g2273 195 PANTHER BZIP TRANSCRIPTION FACTOR 1 195 - -
Gso18g2273 195 MobiDBLite consensus disorder prediction 163 195 - -
Gso18g2273 195 Pfam bZIP transcription factor 84 131 IPR004827 GO:0003700|GO:0006355
Gso18g2273 195 MobiDBLite consensus disorder prediction 181 195 - -
Gso18g2273 195 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 87 102 IPR004827 GO:0003700|GO:0006355
Gso18g2273 195 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 195 IPR044521 -
Gso18g2273 195 SMART brlzneu 80 144 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2273 Gso-Chr18 55617526 55618480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2273 43 179 bZIP Transcription Factor Family AT3G30530 62.857 3.52e-51 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso18g2273 bZIP_1 1.9e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2273 - - gmx:780548 352.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2273 18 55617526 55618480 Gso8g2094 8 22596510 22597415 GST
Gso13g0331 13 14704089 14705071 Gso18g2273 18 55617526 55618480 PCT
Gso19g0334 19 5382727 5383760 Gso18g2273 18 55617526 55618480 PCT
Gso18g2273 18 55617526 55618480 Gso13g0331 13 14704089 14705071 PCT
Gso18g2273 18 55617526 55618480 Gso19g0334 19 5382727 5383760 PCT