Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2270 ATGACGATTAGTAGTCTTGCACCTAAGGCAGAGAGGAAGAAATCAAGGAAGAGCAAGGCAGTTGTTAATGAGAATGCACCCTTGTTGCCAAAAAGTCATGTTCAGGAGAGTGATGCTGGGTTTGATGATTTCAATGGAGCTTCATTTTCTGGGGCTGTTTTTAACTTGTCCACCACAATTATTGGTGCTGGCATCATGGCCTTGCCTGCAACCTTGAAACAGTTGGGGATGATACCTGGTCTTCTTGCCATCATCATCATGGCTTTGTTGACAGAGAAGTCAATTGAGCTTTTGATTCGGTTTACCCGGGCAGGGAAGTCTGTTTCTTATGCTGGTCTCATGGGGGATTCCTTTGGGAATTATGGAAAAGCTCTGGTGCAGATATGTGTTATAATCAATAACATCGGTGTGCTGATTGTTTACATGATTATAATTGGTGATGTGCTCTCTGGAACATCTTCAAGTGGAGATCATCACTATGGTATCCTTGAAGGATGGTTTGGTGTGCACTGGTGGACGGGGCGAACATTTGTTGTCCTTTTTACAACACTTGCCATATTTGCACCCCTTGCAAGCTTTAAGCGAATTGATTCATTGAGATTCACATCAGCCCTTTCAGTCGCACTTGCAGTTGTTTTTCTAGTCATTGCCGTGGGAATTGCAGTTGTCAAGATATTCAGTGGAGGCATTGCGATGCCCAGACTCTTCCCTGTCACTACTGATGTGGCATCATTCTTTAGACTATTCACTGTAGTTCCTGTGTTTGTGACTGCATATATCTGCCACTACAATGTTCACAGCATAGACAATGAACTTGAGGACTCCTCACAGATGCGAGGGGTAGTACAAACCGCCCTTGTTCTATGCTCTTCAGTGTACGTAATGATAAGCTTCTTTGGGTTCCTCCTATTTGGCGAAGGAACTCTTGATGATGTGCTGGCCAATTTCGATACCAATCTTGGAATTCCTTTCGGTTCTGTGCTCAATGATGCTGTTCGTATAAGCTACGCCGCACACCTGATGCTTGTATTTCCAGTTGTCTTCTTTCCATTGCGTCTCAACATAGATGGCCTCCTCTTCTCTAAATCAAGGCCTCTGGTTCTGGATAACTTCAGATTTGCATCACTCACTATTGCCCTTATTGGTGTTATCTTCCTGGGAGCAAATTTCATACCTAGCATTTGGGATGCTTTCCAGTTTACTGGAGCAACTGCCGCAGTCTGTATAGGATTCATTTTTCCAGCTGCCATCACTCTTAGGGACCGCTACAACATTGCAACTAAATCAGACAAGATTTTGTGTGTCATTATGATAGTCCTCGCAGTCTTCTCAAACGTTGTGGCTATATACAGTGATGCATATGCCTTGATCAAGCAGAACAAAACTTCACGAGAATGA 1398 0.4363 MTISSLAPKAERKKSRKSKAVVNENAPLLPKSHVQESDAGFDDFNGASFSGAVFNLSTTIIGAGIMALPATLKQLGMIPGLLAIIIMALLTEKSIELLIRFTRAGKSVSYAGLMGDSFGNYGKALVQICVIINNIGVLIVYMIIIGDVLSGTSSSGDHHYGILEGWFGVHWWTGRTFVVLFTTLAIFAPLASFKRIDSLRFTSALSVALAVVFLVIAVGIAVVKIFSGGIAMPRLFPVTTDVASFFRLFTVVPVFVTAYICHYNVHSIDNELEDSSQMRGVVQTALVLCSSVYVMISFFGFLLFGEGTLDDVLANFDTNLGIPFGSVLNDAVRISYAAHLMLVFPVVFFPLRLNIDGLLFSKSRPLVLDNFRFASLTIALIGVIFLGANFIPSIWDAFQFTGATAAVCIGFIFPAAITLRDRYNIATKSDKILCVIMIVLAVFSNVVAIYSDAYALIKQNKTSRE* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2270 465 PANTHER AMINO ACID TRANSPORTER AVT6A 10 463 - -
Gso18g2270 465 Pfam Transmembrane amino acid transporter protein 47 450 IPR013057 -
Gso18g2270 465 PANTHER AMINO ACID TRANSPORTER 10 463 - -
Gso18g2270 465 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2270 Gso-Chr18 55576992 55580702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2270 3 465 Amino Acid or Auxin Permease AAAP Family AT3G30390 67.819 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2270 K14207 - gmx:100796345 868.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2270 18 55576992 55580702 Gso8g2092 8 22540469 22544258 GST
Gso19g0331 19 5301808 5306674 Gso18g2270 18 55576992 55580702 PCT
Gso18g2270 18 55576992 55580702 Gso19g0331 19 5301808 5306674 PCT