Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2241 ATGAAGTGGTGTTGCTCTGCCAGCTTCGTCATCGTCTCTCTTACAGGATTCTGCAACGACGAATATGAGAAGATTGTTGTGTACGAGTACATGTCCAATGGATCTCTAAATCGACACCTACGAGAGATATGCATAGGAGCAGCAAGTGGACTACACTACCTTCACACCGACACTAACAACATTCTTTTGGATGATAACATGCAGCCAAAACTCACAGATTTCGACCTTGGCGTACACGGAGCATGTTTTATGTCAAAGCCAAAACCAATTAAAGTAGAGAATGATATTTATATGGGTACTTGTGTCTACATGGCTTTGGAGCATCTCAGGGAGCATATAGTCACAGATAAATCTGATGTCTACTCATTTGGTATAGTTCTACTAAAGTTGTGTGGGGAAGAAACTTTTATGGCATGGCAACAAGAGGAAAACTTGGCTGAAAATCTGTTGAGAGAGAAACTGATCCTGATATCAAAGGAAAGATTGCACCAGAGTGTTGGCAAGTCTTTATAG 513 0.4113 MKWCCSASFVIVSLTGFCNDEYEKIVVYEYMSNGSLNRHLREICIGAASGLHYLHTDTNNILLDDNMQPKLTDFDLGVHGACFMSKPKPIKVENDIYMGTCVYMALEHLREHIVTDKSDVYSFGIVLLKLCGEETFMAWQQEENLAENLLREKLILISKERLHQSVGKSL* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2241 170 PANTHER OS07G0166700 PROTEIN 11 147 IPR045272 GO:0004714|GO:0006468
Gso18g2241 170 ProSiteProfiles Protein kinase domain profile. 1 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g2241 170 Gene3D Transferase(Phosphotransferase) domain 1 7 169 - -
Gso18g2241 170 SMART serkin_6 3 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g2241 170 SUPERFAMILY Protein kinase-like (PK-like) 11 157 IPR011009 -
Gso18g2241 170 PANTHER TYROSINE KINASE FAMILY PROTEIN 11 147 - -
Gso18g2241 170 Pfam Protein kinase domain 10 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2241 Gso-Chr18 55348063 55352437 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2241 11 155 Receptor kinase-like Gene Family AT5G61350 38.798 1.62e-25 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Gso18g2241 Pkinase 3e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2241 - - gsj:114397434 352.443