Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2234 ATGTTGTTCGATCGTTTGGCCTTCTGCTGTTCAAAGCACACAAGTTCATCTCAAACAAAATATCCAACAGTAATAGAAGAGCTGTGCCACCAATTTTCTCTGGCCAATCTTAAGAAATCAACCAACAATTTTGATGAAAATGGAGTAATTGGATATGGAAGATTTGGTAAAGTATACAAAGGTTGTCTTCAACATAATGATGGTTCTGATTATTCAGTCACATTAAAACGATTGGACGTGAAAGATAGTCGAGGATTGGAACAGTTCAAGAATGAAATAGAGTTGCTCTGCCAGCTTCGCCACCCTAATTGTGTCTCTCTTATAGGATTTTGCAACCACAAAAAAGAGAAGATTCTTGTGTACGAGTACATGTCTAATGGATCTCTACATCAACACCTACGAGGTGGCCTATTGTCATGGAAGAAAAGGCCAGAGATTTGTATAGAAGCAGCGCATGGACTACACTACCTTCACACTGGAGCTAAACGCACCATCATTCACCGTAACATCAACCCTAGCAACATTCTTTTGGATAACAACATGAAGTCAAAACTTACTGATTTCCGCCTTAGCATACAGGGACCACGTTATGGGTCAAAGCCAAAACCAATTAAAGTATATGTTATTGAGGAAGTTGTGTGTGGAAGAAACTGTTTAATAATTCCAACAGAAACAGAAGTTCTGGAGAAGCCTGTTGAGGAGAATATTGACCAGAATATCAAAGGAAAGATTGCACCAGAGTGTTGGCAAGTCTTTATAGATATCATAATAAGATGCTTGAAGTATGAACCGGATGAGCGACCAACGATGGGGGAAGTAGAAGTGCAACTTGAGCATGCTCTTTCAATGCAGGAACAAGCAGATATCACAAACACCAACAGTGATTATACCTTATTTTCCACCACCACTATTCACCTAGGACTGGAACTGGAATCCAACCCAGAAGAAAGTGATACTTAA 960 0.3958 MLFDRLAFCCSKHTSSSQTKYPTVIEELCHQFSLANLKKSTNNFDENGVIGYGRFGKVYKGCLQHNDGSDYSVTLKRLDVKDSRGLEQFKNEIELLCQLRHPNCVSLIGFCNHKKEKILVYEYMSNGSLHQHLRGGLLSWKKRPEICIEAAHGLHYLHTGAKRTIIHRNINPSNILLDNNMKSKLTDFRLSIQGPRYGSKPKPIKVYVIEEVVCGRNCLIIPTETEVLEKPVEENIDQNIKGKIAPECWQVFIDIIIRCLKYEPDERPTMGEVEVQLEHALSMQEQADITNTNSDYTLFSTTTIHLGLELESNPEESDT* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2234 319 PANTHER OS07G0166700 PROTEIN 15 208 IPR045272 GO:0004714|GO:0006468
Gso18g2234 319 PANTHER OS07G0166700 PROTEIN 208 300 IPR045272 GO:0004714|GO:0006468
Gso18g2234 319 Gene3D Phosphorylase Kinase; domain 1 5 123 - -
Gso18g2234 319 PANTHER TYROSINE KINASE FAMILY PROTEIN 15 208 - -
Gso18g2234 319 PANTHER TYROSINE KINASE FAMILY PROTEIN 208 300 - -
Gso18g2234 319 SUPERFAMILY Protein kinase-like (PK-like) 18 281 IPR011009 -
Gso18g2234 319 ProSiteProfiles Protein kinase domain profile. 44 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g2234 319 Gene3D Transferase(Phosphotransferase) domain 1 124 207 - -
Gso18g2234 319 Gene3D Transferase(Phosphotransferase) domain 1 208 304 - -
Gso18g2234 319 Pfam Protein tyrosine and serine/threonine kinase 49 193 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2234 Gso-Chr18 55281150 55283087 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2234 11 288 Receptor kinase-like Gene Family AT3G51550 38.558 7.14e-61 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gso18g2234 PK_Tyr_Ser-Thr 8.1e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2234 - - gmx:100305395 635.18