Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2232 ATGTTTCTAAAATGTTTTGGCCACTCAAGTTCATCACAGAGACAGTATCCAACAATAATAGAAGAGTTGTGCCATCAATTTTCTCTTGCCGATCTTGGGAAATCAACCAACAACTTTGATCAAAACAGAGTTATTGGGCGTGGAGCATTTAGTACGGTATACAAAGGTTGTCTCCAACATAAAGATGGTTCTGATTATACAGTCGCATTAAAACGGTTTCATGAAGGATACAGTGCAGTGTTCAAGAAAGAAATAGAGTTGCTCTGCCAGCTTCGCCACCCTAATTGTGTTTCTCTTATTGGATTCTGCAACCATGAGAAAGAGAAGATTATTGTCTACGAGTACATGTCCAATGGATCTCTAGATAGACACCTACTACGTGGGAAACTGTCATGGAAAAAAAGGGTAGAGATTTGCATAGGAGTAGCGTGTGGATTACACTACCTTCATGCTGGAGCCAAGCGCTCCATCTTTCATTGTATCCTCAGAGCCAGTACCATTCTTTTGGATGAAGACAAGGAGCCAAAACTCGCAGGATTCGGCCTTAGCATACAGGGACCGCAATTTAATTCGAAGAAGCCGAAACAAATTAATGCAGATCATATTATGGATACTCTTGGTTACATGCCTTTGGAGTATGTCATGAATGGTTCTGTCACTGATAAATGGGATGTTTTCTCATTTGGTTTGGTTCTGCTACGAGTTGTGTGTGGAATGGATTATTTCATAATGGCAGCAGAGAGGAAACTTATGGAGAAGCCTGTTGAAGAGAATATTGATTCGAATATCAAAGGAAAGATTGCACCGGAGTGTTGGCAAGTCTTTATAGATATCATGGTCAGATGCTTGGAGTATGAACCAGATGAGCGACCAGCAATGGGTGAAGTGGAGGTGGAACTTGAGCATGCTCTGTCGCTGCAGGAACAAGCAGATATCACAAACACTGATGGTGATTATAACTTATTGTCCAAAACCATTATTCCCATTGCCCGTGGTAGTGAAATGAAAGAGTAA 1014 0.4112 MFLKCFGHSSSSQRQYPTIIEELCHQFSLADLGKSTNNFDQNRVIGRGAFSTVYKGCLQHKDGSDYTVALKRFHEGYSAVFKKEIELLCQLRHPNCVSLIGFCNHEKEKIIVYEYMSNGSLDRHLLRGKLSWKKRVEICIGVACGLHYLHAGAKRSIFHCILRASTILLDEDKEPKLAGFGLSIQGPQFNSKKPKQINADHIMDTLGYMPLEYVMNGSVTDKWDVFSFGLVLLRVVCGMDYFIMAAERKLMEKPVEENIDSNIKGKIAPECWQVFIDIMVRCLEYEPDERPAMGEVEVELEHALSLQEQADITNTDGDYNLLSKTIIPIARGSEMKE* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2232 337 Gene3D Phosphorylase Kinase; domain 1 5 115 - -
Gso18g2232 337 PANTHER OS07G0166700 PROTEIN 10 323 IPR045272 GO:0004714|GO:0006468
Gso18g2232 337 ProSiteProfiles Protein kinase domain profile. 39 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g2232 337 Pfam Protein tyrosine and serine/threonine kinase 41 298 IPR001245 GO:0004672|GO:0006468
Gso18g2232 337 PANTHER TYROSINE KINASE FAMILY PROTEIN 10 323 - -
Gso18g2232 337 ProSitePatterns Protein kinases ATP-binding region signature. 45 71 IPR017441 GO:0005524
Gso18g2232 337 SUPERFAMILY Protein kinase-like (PK-like) 13 299 IPR011009 -
Gso18g2232 337 Gene3D Transferase(Phosphotransferase) domain 1 116 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2232 Gso-Chr18 55262264 55265362 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2232 8 311 Receptor kinase-like Gene Family AT3G51550 38.226 5.12e-63 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gso18g2232 PK_Tyr_Ser-Thr 1.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2232 - - gmx:100781132 477.633