Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2231 ATGTTTCTCAAATGTTTTGGCTTCGGCGCTCAGAGACAGTATCCAACGGTGATAGAAGAGTTGTGCCATCGATTTTCTCTCGCAGATCTAAGGAAATCAACCAACAATTTCGATCAAAACACAGTAATTGATCATGAAGGAGTTAGTACAGTATATAAAGGTTGTCTGCAACACAATGAAGATGCTTCTGAGTATACAGTGGCTGTAAAGCGATATAAAGCGGAAATGGAAGCAGAAGGGTTTTTCAGGAATGAAATAGAGTTACTCTGTCAGCTTCGTCACCCTAATTTGCTCTCTCTTATAGGATTCTGCAACGACCAAAATGAGAAGATTATTGTGTACGAGTACATGTCCAATGGATCTCTTCATCAACTTCTACAAAGTGGGGTACTGTCATGGAAGAAAAGACTGGAGATATGCATAGGAGCAGCGCGCGGACTACACTACCTTCACGCTGGAGCCAAACGCACCATCATTCACCGTGGCATCAACCCTAAACACATTGTTTTGGATGACAACATGGAGCCAAAACTCACAGGTTTTCGCATTAGCTTACTGGGACCGCGTTCTATGTCAAAGCCAAAACCAATTAAAGTAGATTATATTGCGGGTACTTTGGGCTACTTAGCTAGGGAGGCTGTGTTAGATAATACCGTCACAGATAAAGTTGATGTTTACTCATTTGGTATGGTTCTACTTGATGTTGTGTGTGGAAGGAAATATCTCATGTACCCATGGGACACAGAATTTCTGGAGAAACCTATTGAGAAGAAAATTGATCCGAAAATCAGAGGAAAGATTGCACCCGATTGTTGGAAAGTCATTAAAGATATCACACAAAGATGTGCGAAGTTGGAGCCAGATGAGCGACCAACAATGGGTGAAGTAGAGGTGGAACTTGAGCATGCTCTGTCATTACAAGAACAAGCAGATATAGTAAACACCAACGCTGATTATACCTTAATGTCCAAAACCGTTATATTCCGCCGGATCCATTTTGCTTTGCCCCCCGATTCAGATTGA 1023 0.4184 MFLKCFGFGAQRQYPTVIEELCHRFSLADLRKSTNNFDQNTVIDHEGVSTVYKGCLQHNEDASEYTVAVKRYKAEMEAEGFFRNEIELLCQLRHPNLLSLIGFCNDQNEKIIVYEYMSNGSLHQLLQSGVLSWKKRLEICIGAARGLHYLHAGAKRTIIHRGINPKHIVLDDNMEPKLTGFRISLLGPRSMSKPKPIKVDYIAGTLGYLAREAVLDNTVTDKVDVYSFGMVLLDVVCGRKYLMYPWDTEFLEKPIEKKIDPKIRGKIAPDCWKVIKDITQRCAKLEPDERPTMGEVEVELEHALSLQEQADIVNTNADYTLMSKTVIFRRIHFALPPDSD* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2231 340 PANTHER OS07G0166700 PROTEIN 8 323 IPR045272 GO:0004714|GO:0006468
Gso18g2231 340 Gene3D Phosphorylase Kinase; domain 1 9 116 - -
Gso18g2231 340 ProSiteProfiles Protein kinase domain profile. 37 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g2231 340 Gene3D Transferase(Phosphotransferase) domain 1 117 326 - -
Gso18g2231 340 SUPERFAMILY Protein kinase-like (PK-like) 15 299 IPR011009 -
Gso18g2231 340 Pfam Protein tyrosine and serine/threonine kinase 49 298 IPR001245 GO:0004672|GO:0006468
Gso18g2231 340 PANTHER TYROSINE KINASE FAMILY PROTEIN 8 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2231 Gso-Chr18 55256516 55258854 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2231 19 311 Receptor kinase-like Gene Family AT3G51550 39.806 1.53e-63 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gso18g2231 PK_Tyr_Ser-Thr 2.5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2231 - - gmx:100787367 689.493