Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2230 AAAAAGGAAAAGAAGATATGCATAGGAGCCGCGCGCGGACTACACTACCTTCACGCTGGAGCCAAGCGCACCATCATTCATCGTCATATCAAACCCAGCAACATTCTTTTGGATGATAACATGGAGCCAAAACTCGCAGGTTTCGACCTTAGCATACAGGGAGCACATTTTATGTCAAAGCCAAAACTAATTCAAGTGCCTGCTGCGGGTACTTATGGCTACGTAGCTATGGAGGTTTGGACAGACGATACCGTCACAGATAAAACTGATGTTTACTCATTTGGTATGGTTCTACTTGAAGTTGTGTGTGGAAGGAAATACTTAATGGAGCCAATTGAAACGGAATTTCTGGAAAAACCTCTTGAGGAGAAAATTGATGAAATTATCAAAGGAAGTATCGGACCAGAGTGTTGGCAAGTCTTTGTAGATATCACCCTCAGATGTGTGAAGTTGGAACCAGATGAGCGACCAACAATGGGTGAAGTAGAGGTGGAACTTGAGTATGCTCTGTCCTTGCAAAAGCAAGCAGATAGAGCAAGATATTCCTTATTTTCCACCACCATTATTCCCCCCCCTTTCTCCTTATTCCGGCTTCCTGGGACCTGA 606 0.4406 KKEKKICIGAARGLHYLHAGAKRTIIHRHIKPSNILLDDNMEPKLAGFDLSIQGAHFMSKPKLIQVPAAGTYGYVAMEVWTDDTVTDKTDVYSFGMVLLEVVCGRKYLMEPIETEFLEKPLEEKIDEIIKGSIGPECWQVFVDITLRCVKLEPDERPTMGEVEVELEYALSLQKQADRARYSLFSTTIIPPPFSLFRLPGT* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2230 201 PANTHER TYROSINE KINASE FAMILY PROTEIN 1 180 - -
Gso18g2230 201 Gene3D Transferase(Phosphotransferase) domain 1 1 187 - -
Gso18g2230 201 SMART serkin_6 2 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g2230 201 ProSiteProfiles Protein kinase domain profile. 1 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g2230 201 Pfam Protein kinase domain 4 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g2230 201 SUPERFAMILY Protein kinase-like (PK-like) 4 170 IPR011009 -
Gso18g2230 201 PANTHER OS07G0166700 PROTEIN 1 180 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2230 Gso-Chr18 55252886 55253774 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2230 1 177 Receptor kinase-like Gene Family AT3G51550 40.625 1.71e-39 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gso18g2230 Pkinase 9.3e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2230 - - gmx:100814821 385.956