Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2227 ATGGCTTTATTCATGGCAGTTCTTGGTGTTGTTGCCTTGGTGCTCTGTTTTTGCTCTGCTCTCTTGAAGTGGAATGAATTGAGGTATAGGAGGAAAGGTTTGCCTCAAGGCACAATGGGGTGGCCTGTTTTTGGGGAGACAACTGAGTTTCTTAAGCAAGGTCCAAGCTTCATGAAGAACAAGAGGGCAAGGTATGGCAGTTTTTTCAAATCCCACATCCTGGGGTGTCCTACCATTGTATCCATGGATCCAGAGCTTAATAGGTACATACTCATGAATGAAGCAAAAGGGCTTGTTCCAGGGTACCCACAATCCATGTTAGATATCTTAGGCACACGCAATATTGCAGCTGTTCATGGCTCCACTCACAAGTACATGAGAGGAGCACTTCTTTCAATCATTAGCCCCACCTTGATCAGAGACCAGCTTTTACCAAAAATTGATGAGTTCATGAGAACCCACTTGAGTGATTGGGATAACAAAGTCATTAACATCCAAGAGAAAACTAAAGAGATGGCATTTCTCTCTTCCCTGAAGCAGATTTCTGGTATGGAATCCAGCTCAATATCCCAACCCTTCATGACAGAGTTCTTTAAACTTGTTTTAGGAACTCTATCTTTGCCTATTAACCTTCCTGGCACAAATTATCGCCGTGGATTGCAGGCAAGAAAGAGTATTGTCAGCATTCTTAGTCAGCTGCTAGAGGAAAGGAAAACATCTCAAAAGGGCCACGTGGACATGCTTGGTTGCTTGATGAATAAAGATGAAAATCGATACAAACTAACTGATGAGGAAATCATTGATCTAATTATTACAATTATGTATTCTGGTTATGAAACTGTTTCAACCACATCAATGATGGCAGTGAAGTACCTCCATGATCATCCCAAAGTTCTTGAAGAAATCAGAAAAGAGCATTTTGCCATTAGGGAAAGGAAAAATCCCGAGGATCCAATTGATTGTAATGATCTCAAGTCAATGAGGTTTACTCGTGCGGTGATTTTTGAGACCTCCAGATTAGCTACGATAGTTAATGGGGTTCTAAGAAAAACAACTCATGACATGGAACTAAACGGCTATTTGATTCCTAAAGGGTGGAGGATATATGTATATACGAGAGAGATCAATTATGATCCATTTCTGTATCATGATCCACTAACATTCAATCCATGGAGATGGCTGGGTAACAGTCTAGAGTCACAAAGCCACTTCTTGATATTTGGAGGAGGGACCAGACAATGTCCAGGGAAGGAGTTGGGGATAGCAGAAATTTCCACTTTCTTACACTACTTTGTAACCAGATACAGGTGGGAAGAAATAGGAGGAGATAAACTGATGAAATTTCCTAGAGTTGTGGCACCAAATGGACTGCACATAAGGGTCTCGTCTAACTAA 1395 0.4122 MALFMAVLGVVALVLCFCSALLKWNELRYRRKGLPQGTMGWPVFGETTEFLKQGPSFMKNKRARYGSFFKSHILGCPTIVSMDPELNRYILMNEAKGLVPGYPQSMLDILGTRNIAAVHGSTHKYMRGALLSIISPTLIRDQLLPKIDEFMRTHLSDWDNKVINIQEKTKEMAFLSSLKQISGMESSSISQPFMTEFFKLVLGTLSLPINLPGTNYRRGLQARKSIVSILSQLLEERKTSQKGHVDMLGCLMNKDENRYKLTDEEIIDLIITIMYSGYETVSTTSMMAVKYLHDHPKVLEEIRKEHFAIRERKNPEDPIDCNDLKSMRFTRAVIFETSRLATIVNGVLRKTTHDMELNGYLIPKGWRIYVYTREINYDPFLYHDPLTFNPWRWLGNSLESQSHFLIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEEIGGDKLMKFPRVVAPNGLHIRVSSN* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2227 464 SUPERFAMILY Cytochrome P450 27 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2227 464 Pfam Cytochrome P450 35 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2227 464 PANTHER CYTOCHROME P450 26 8 462 - -
Gso18g2227 464 PANTHER CYTOCHROME P450 FAMILY PROTEIN 8 462 - -
Gso18g2227 464 PRINTS P450 superfamily signature 276 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2227 464 PRINTS P450 superfamily signature 332 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2227 464 PRINTS P450 superfamily signature 405 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2227 464 PRINTS P450 superfamily signature 414 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2227 464 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 407 416 IPR017972 GO:0005506|GO:0016705
Gso18g2227 464 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2227 464 PRINTS E-class P450 group I signature 265 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2227 464 PRINTS E-class P450 group I signature 285 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2227 464 PRINTS E-class P450 group I signature 331 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2227 464 PRINTS E-class P450 group I signature 371 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2227 464 PRINTS E-class P450 group I signature 404 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2227 464 PRINTS E-class P450 group I signature 414 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2227 464 Gene3D Cytochrome P450 25 462 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2227 Gso-Chr18 55219396 55223658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2227 82 462 Cytochrome P450 AT5G38970 69.634 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2227 K09590 - gmx:100785414 931.784
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2227 18 55219396 55223658 Gso8g2057 8 21911304 21915436 GST
Gso13g0351 13 15033326 15036861 Gso18g2227 18 55219396 55223658 PCT
Gso19g0297 19 4377964 4381869 Gso18g2227 18 55219396 55223658 PCT
Gso18g2227 18 55219396 55223658 Gso13g0351 13 15033326 15036861 PCT
Gso18g2227 18 55219396 55223658 Gso19g0297 19 4377964 4381869 PCT