Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2224 ATGAGGGTTGTTATATCAGCAGTATGTGCTATTGTGCTATTCTCTTATGCAGCTGCGTACGATCCTTTGGATCCAAACGGAAACATAACGATCAAATGGGATGTTGTGTCATGGACACCAGATGGCTATGTGGCTGTGGTAACAATGAGCAATTTCCAAATGTTTCGGCACATCATGAATCCTGGATGGACCTTGGGATGGACATGGGCAAAGAAGGAAGTTATATGGTCCATGGTAGGAGCTCAAACCACAGAACAAGGAGACTGTTCTAAGTTCAAAGGCAATGTACCTCACTGCTGCAAGAAAACTCCCACAGTTGTAGACTTGCTCCCTGGTGTGCCTTACAACCAGCAATTCTCAAACTGTTGTAAGGGTGGAGTGGTGGCAGCATGGGGCCAAGACCCTTCATCAGCAGTCTCATCCTTCCAAGTGAGTATTGGGCTAGCCGGTACTTCAAACAAGACAGTTAAACTCCCCAAGAATTTCACTCTCTTGGGTCCAGGACCAGGCTACACTTGTGGTCCTGCCAAGGTTGTTCCTTCCACCGTTTTCCTTACACCTGACAAGCGCCGCAAGACTCAAGCACTAATGACATGGAATGTTACTTGCACATACTCACAATTTCTGGCTAGAAAGAACCCGGGTTGCTGTGTATCTCTGTCATCCTTCTACAATGAGACCATTACCCCTTGCCCCACTTGTGCCTGTGGCTGCCAGAACAGGAGGAACTGTGTCAAGAGTGACTCTAAACGTATCAACATGGTGGGGATTCACACTCCAAAGAAAGACAATGAACCATTGCTACAGTGCACTCATCATATGTGTCCAATAAGGGTGCACTGGCACGTGAAGCTCAACTATAAGGACTATTGGCGAGTCAAGGTTGCTGTGACGAATTTCAACTACAGGATGAATTACTCCCTCTGGACTCTTGCTGTTCAGCATCCAAATCTTAACAATGTCACCCAAGTTTTTAGCTTTGATTACAAGCCTTTACTTCCCTATGAGTCCATAAATGACACTGGTATGTTCTATGGCATGAAATACTTTAATGATCTCTTAATGGAAGCTGGACCAACTGGGAATGTTCAATCAGAAATTCTTCTTCAGAAGAACCAGGAAACATTCACATTCAAGCAAGGATGGGCATTTCCTCGCAAGGTCTACTTTAATGGTGAGGAATGCATGCTGCCACCTCCTGATAGCTACCCGATCCTCCCTAATTCTGCCCCTGTGAACTTATTAAACTTCCCAGCATTCATTTTCACAATGCTTGTCATGATAGCTGTTTGGTGA 1296 0.4522 MRVVISAVCAIVLFSYAAAYDPLDPNGNITIKWDVVSWTPDGYVAVVTMSNFQMFRHIMNPGWTLGWTWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFSNCCKGGVVAAWGQDPSSAVSSFQVSIGLAGTSNKTVKLPKNFTLLGPGPGYTCGPAKVVPSTVFLTPDKRRKTQALMTWNVTCTYSQFLARKNPGCCVSLSSFYNETITPCPTCACGCQNRRNCVKSDSKRINMVGIHTPKKDNEPLLQCTHHMCPIRVHWHVKLNYKDYWRVKVAVTNFNYRMNYSLWTLAVQHPNLNNVTQVFSFDYKPLLPYESINDTGMFYGMKYFNDLLMEAGPTGNVQSEILLQKNQETFTFKQGWAFPRKVYFNGEECMLPPPDSYPILPNSAPVNLLNFPAFIFTMLVMIAVW* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2224 431 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0031225
Gso18g2224 431 PIRSF COBRA 1 431 IPR006918 GO:0010215|GO:0031225
Gso18g2224 431 PANTHER COBRA-LIKE PROTEIN 4 428 - -
Gso18g2224 431 PANTHER PROTEIN COBRA 4 428 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2224 Gso-Chr18 55202062 55204727 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2224 19 430 COBRA Gene Family AT3G29810 66.990 0.0 611
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2224 - - gmx:100784352 918.302
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2224 18 55202062 55204727 Gso8g2054 8 21857642 21860392 GST
Gso18g2224 18 55202062 55204727 Gso19g0294 19 4338044 4341123 PCT