Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2223 ATGGGCTTCTCTCTGTTACCAAAAGCAACTCCTTGCATTTTGTTCTTGGCTCTGCTGTTTTGTACTTGCTTCACTTCAACAGATGCTTATGATCCGCTTGACCCAAATGGGAATATCACAATCAAATGGGATATTATAAGCTGGACCCCTGATGGATATGTGGCTGTTGTTACGATGAACAACTTCCAACAATATCGTCATATCGCTTCACCTGGCTGGTCAATGGGATGGACATGGGCGAAAAAGGAGGTAATATGGAGCATGATGGGAGGGCAGACCACTGAACAAGGGGATTGTTCAAAATTTAAGGGTGGTATTCCACATTGCTGTAAGAAAGATCCGACAGTTGTAGATTTGCTTCCTGGAACACCTTACAATCAACAAATTGCAAATTGCTGCAAAGGTGGGGTGCTCAGTTCATGGGCGCAGGATCCAACCAATGCAGTTTCATCATTTCAAGTCAGTGTTGGTAGAGCTGGAACCACAAACAAAACTGTCAAAGTCCCCAAAAACTTCACCTTGAAAGCACCAGGACCAGGTTATACTTGTGGGCCAGCCAAGATTGTGGCACCCACTAAATTCATTACTTCAGACAAAAGGAGAGTGACCCAAGCACTGATGACATGGAATGTGACATGCACATACTCACAATTTCTGGCTCAGAAAACTCCCTCTTGCTGTGTCTCACTTTCATCTTTCTATAATGATACCCTTGTTCCCTGCCCAACATGTGCATGTGGCTGCCAAAGTAACTCGTCTCGGTCAGGGACCTGTGTAGATCCAGATACACCACATTTGGCATCAGTTGTTGCTGGCTCTGGGAAGAATAACTTTTCACCTTTGGTTCAATGTACTAGACATATGTGCCCAGTCCGTATCCACTGGCATGTTAAGCTTAACTACAAGGAGTACTGGCGTGTGAAGGTTACTATTACTAATTTTAATTACAGGATGAATTATTCTGAGTGGAACATGGTTGTTCAACATCCAAACTTTGACAATCTGACTCAGCTGTTCAGTTTCAACTACAAGTCATTGACTCCTTATGGTTCAATAAATGATACTGCAATGCTATGGGGAGTTAAGTTCTATAATGATTTTCTCAACCAAGCTGGCCCTAATGGCAATGTTCAATCAGAGCTACTCTTCCGAAAGGATAAAGCAACTTTTACTTTTGATAAGGGTTGGGCTTTTCCTCGAAGGGTCTACTTCAACGGTGACAACTGTGTAATGCCACCACCTGATTCTTATCCGTGGTTACCTAATGCTGGTGCTAGGCAAGAGGTTTCCTTGTTTTCTTTAGTGATAGCATCTTTGGTAGCCTTGGTATTTTATGCTCACGCATAA 1347 0.4298 MGFSLLPKATPCILFLALLFCTCFTSTDAYDPLDPNGNITIKWDIISWTPDGYVAVVTMNNFQQYRHIASPGWSMGWTWAKKEVIWSMMGGQTTEQGDCSKFKGGIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLSSWAQDPTNAVSSFQVSVGRAGTTNKTVKVPKNFTLKAPGPGYTCGPAKIVAPTKFITSDKRRVTQALMTWNVTCTYSQFLAQKTPSCCVSLSSFYNDTLVPCPTCACGCQSNSSRSGTCVDPDTPHLASVVAGSGKNNFSPLVQCTRHMCPVRIHWHVKLNYKEYWRVKVTITNFNYRMNYSEWNMVVQHPNFDNLTQLFSFNYKSLTPYGSINDTAMLWGVKFYNDFLNQAGPNGNVQSELLFRKDKATFTFDKGWAFPRRVYFNGDNCVMPPPDSYPWLPNAGARQEVSLFSLVIASLVALVFYAHA* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2223 448 PANTHER PROTEIN COBRA 7 447 IPR006918 GO:0010215|GO:0031225
Gso18g2223 448 PIRSF COBRA 3 448 IPR006918 GO:0010215|GO:0031225
Gso18g2223 448 Pfam COBRA-like protein 53 216 IPR006918 GO:0010215|GO:0031225
Gso18g2223 448 PANTHER COBRA-LIKE PROTEIN 7 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2223 Gso-Chr18 55198206 55202053 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2223 1 448 COBRA Gene Family AT3G02210 73.289 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2223 - - gmx:100783820 956.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2223 18 55198206 55202053 Gso8g2053 8 21851738 21855475 GST
Gso19g0294 19 4338044 4341123 Gso18g2223 18 55198206 55202053 PCT
Gso18g2223 18 55198206 55202053 Gso13g0355 13 15061140 15065536 PCT
Gso18g2223 18 55198206 55202053 Gso19g0293 19 4333131 4337770 PCT