Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2219 ATGCTTCTGAGTAAGAGACAAGTAATTGGAAGAATGTTTCTCAAATGTTTTGGCCTCTACCGTTCAAGTTCATCTCAGAGACAGTATCCAACAATAATAGAAGAGTTGTGCCATAAATTTTCTCTAGCGGATCTTAGGAAGTCAACCAACGACTTTGATCAAAACAGAGTTATTGACATTAGAGCATTTGGTATCAAAATATATAAAGGTTGTCTTCAACATAATGATGGTTCTGATTATGCAGTTGCAGTAAAGCGATTTAAAGTGAAAGATATTCAAGCATGGGAAGTGTTCAAAAGCGAAATAGAATTGCTCTGCCAGCTTCGTCACCCTAACATCGTCTCTCTTGTAGGTTTCTGCAACGACGAATATGAGAAGATTATTGTGTACGAGTACATGTCCAATGGATCTCTAAATGAACGGCTACAAGGTGGGGAACTGTCATGGAAGAAAAGGGTAGAGATATGCATCGGAGCAGCACGTGGACTACACTACCTTCACGCTGGAGCCAAGCGCACCATCATTCACCGTCACATCAAACCTAACAACATTGTTTTGGATGACAACATGAAGCCAAAACTCACAGATTTTGGCATTAGCGTACTGGGACCACGTTTTATGTCAAAACCAAAACCAATTAAAGTAGATTCTGTTGTGGGTACTTTTGGCTACCTGGCTAGGGAGCATCTCACGGACCACACCGTCACAGATAAAACTGATGTTTACTCATTTGGTATGGTTCTACTTGAAGTTGTGTGTGGAAGGATATATGTAACAACAGAACTTGAGAAGCCTGTTGAGGAGAAAATTGATCCTAATATCAAAGGAAAGATTGCACCAGAGTGTTGGCAAGTCTTCATAGATATCACCCGAAAGTGCGTGAAATATGAAGCACATGAGCGACCAACAATGGGTGAAGTAGAGGTAGAACTTGAGCATGCTCTGTCGTTGCAGGAACAAGCAGATATCACAAACACCATTATTGGAGAATATACCTTATTGTCCAAAACCATTATTAACCTAATATAG 1029 0.4023 MLLSKRQVIGRMFLKCFGLYRSSSSQRQYPTIIEELCHKFSLADLRKSTNDFDQNRVIDIRAFGIKIYKGCLQHNDGSDYAVAVKRFKVKDIQAWEVFKSEIELLCQLRHPNIVSLVGFCNDEYEKIIVYEYMSNGSLNERLQGGELSWKKRVEICIGAARGLHYLHAGAKRTIIHRHIKPNNIVLDDNMKPKLTDFGISVLGPRFMSKPKPIKVDSVVGTFGYLAREHLTDHTVTDKTDVYSFGMVLLEVVCGRIYVTTELEKPVEEKIDPNIKGKIAPECWQVFIDITRKCVKYEAHERPTMGEVEVELEHALSLQEQADITNTIIGEYTLLSKTIINLI* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2219 342 PANTHER OS07G0166700 PROTEIN 22 335 IPR045272 GO:0004714|GO:0006468
Gso18g2219 342 Pfam Protein tyrosine and serine/threonine kinase 62 309 IPR001245 GO:0004672|GO:0006468
Gso18g2219 342 Gene3D Phosphorylase Kinase; domain 1 17 132 - -
Gso18g2219 342 SUPERFAMILY Protein kinase-like (PK-like) 27 314 IPR011009 -
Gso18g2219 342 ProSiteProfiles Protein kinase domain profile. 52 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g2219 342 PANTHER TYROSINE KINASE FAMILY PROTEIN 22 335 - -
Gso18g2219 342 Gene3D Transferase(Phosphotransferase) domain 1 133 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2219 Gso-Chr18 55175195 55176495 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2219 10 322 Receptor kinase-like Gene Family AT3G51550 41.298 1.31e-77 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gso18g2219 PK_Tyr_Ser-Thr 2.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2219 - - gmx:100812131 674.855