Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2217 ATGTGTGCTGCTTCCATTGCATTAGCCATATCGATGGACACAAATTGCATACGAATTGCTTTAGGAACAATCCTCCTCATATTGCCGTGTCTCCCTTTCCTCTCCATAGCAGAGGTTATTTATCCTCCCCTTGAGCTCTTCAGCATCAGCTGTGGATCATCCACCAACTTCACACTCGATGGTCGGAACTGGATTGGAGACAACAACAGTAAACTCCTCTCCGAAAGCCAGGGCTCAGTTGCTGCTCCTCCAAACACACCAACAACAATACAGGGCCCTTACACTTATGCTCGTCTCTCTCACTCAAAATTCACCTACTCCTTCTCTCTCAAAGCAGGCCCAAAATTTGTTCGCCTCTTCTTCTACTCAGTTTCATACCAAAGCTTTGATCGCACCAAAGCCTGTTTCTCAGTCACAGCTGGCCCATACACCCTCCTTCGAGATTTCGATGCTTCCCTCAATGCCGCTGCTGATGACGACCCCGGCCAGCCCGACATCTTGTTCAGAGAGTATTGCATCAACCTTGAAGATGGTCACAAGCAGCTCAACATAACGTTCATTCCAAGCAAAACAGCTCAACATCCATATTCGTACGCTTTCATCAATGGAATCGAGATTGTTTCAATGCCCCCTTTTCTCTACTACACCAATCCTCACGACTACGCTCGAGTGCCGCAAATTGTTGGCACACTATCCCAATATCATATTGAAAACAGCTTAGCTCTGGAGACTATCTACCGGTTAAACGTCGCAGGAAATGACATCACCGCCTCAAGAGACACAGGTATGCTCAGAACCTGGAAAGTCGATGACAACTACCTAACTACTCAAAGTGCACCATCTGTTGATTTTGGGCGTATAACTAAGCTGAGCTTCAATATGACTCAAAACTACACGGCACCAGACGAAGTGTACCGAACCGTAAGGAACATGGGAATGGGCTCTATGAACATGAGATTCAACCTCACATGGCAGCTTCCTGTTGATTCTGGCTTCACCTACTTGCTAAGGTTACACTTTTGCCAGCTTGACCCGCAAGTTCGCCTGGCTGGTGACCTGATGTTCTTCATCTACATAGAGGATCAGTTGGTTACCAATTGGGCAGATGTTCTCTTATGGACCTATAACCAGAAGGGTGTCCCAGTGGTTAGAGACTATGTAGTTTCCATCCCGGTGAATCAGAAGAAACCAAATCTTTCACTGAAACTGCATCCTCACCCTCAAAGCAACATCAAGGACGCACAACTAAACGCCCTTGAACTCTTCAAAATTAACGAATCAACAGGTAATCTTGCCGGACCGAACCCAGACCCTCCTCAACAAACCCCCAAGGCTCCTGTTGAAAACTCAAAAAAGAAAAGCAGCTGCACCACAAGAACTCTTGCCGCCGTCGCAGGTGCAGTTTCCGGTGTCGTTTGGGTCTCCCTTGTTGTCGCTTTCTTCCTCATCAAACGCAAGAAGAACGTCGCCATTGACAAGTGTTCCAACCAAAACGACGGAAGCTCTCATGGCGATGGCTCATCATCGCTACCAACCAACCTCTGCCGCCACTTCTCAATCGAAGAAATCAGAGCCGCCACCAACAACTTCGATGAACTCTTCATCGTTGGCACGGGAGGCTTCGGCAACGTGTACAAAGGCTACATCGAGGACAGTTCAACACCCGTCGCAATCAAAAGGCTCAAACCGGGTTCTCGGCAAGGTGTGGATGAGTTCGTGACCGAGATCGAAATGCTTTCTCAACTTCGTCATCTAAATCTCGTTTCCCTCCTCGGTTACTGTTATGAGAGCAATGAGATGATACTTGTTTACGAATTCATGGATCACGGAGCTCTCCGTGACCATCTCTACGACACTGATAACCCGTCTTTGTCGTGGAAGCAAAGACTTCATATATGTATAGGTGTTGCACGAGGACTGAATTATCTACATACAGGTGTGAAGCACATGATTATTCACCGTGACGTGAAGAGCACCAATATCTTGTTGGATGCAAAATGGGCGGCCAAGGTTTCAGACTTTGGGTTATCCCGAATTGGGCCCACAGGTATTTCGATGACCCATGTGAACACTGGGGTGAAAGGTAGCATTGGATATTTAGACCCCGAGTATTACAAACGACTACGTTTGACGGAGAAGTCTGACGTGTACTCCTTTGGGGTGGTGCTCTTGGAGGTATTATCTGGGAGGCAGCCTTTGCTCCATTGGGAGGAGAAATCTGAGGTGTACTCATTTGGGGTGATGCTGTTGGAGGTGTTATCTGGGAGGCACCCTTTGCTCCATTGGGAGGAGAAACAACGAATGTCACTTGCTAATTGGGCAAAACATTGCTATGAGAAGGGAACTCTGAGTGAGATTGTGGATTCAGAACTCAAGGGCCAGATAAAACCTCAATGTTTGAACAAATTTAGTGAGGTGGCACTGAGCTGTTTGCTTGAGGATGGGACTCAACGACCTTCCATGAAAGACATTGTTGGGGTGTTGGAGTTTGTTCTTCAGTTTCAGGATAGTGCTGTTAATTATGAAGATAGCAGTAGCCATAGTACTGTACCTCTTTCAGATTGTAGTGAGAACACTGGATCAAGCACGACAAGTGATGGAGATCGTAGCAATGGCAGGATGGAATCTTTTGTGTTGATCCCGGATGATGTTTTCTCTGAGACTAAGAATCCAAAGGGACGATGA 2685 0.4693 MCAASIALAISMDTNCIRIALGTILLILPCLPFLSIAEVIYPPLELFSISCGSSTNFTLDGRNWIGDNNSKLLSESQGSVAAPPNTPTTIQGPYTYARLSHSKFTYSFSLKAGPKFVRLFFYSVSYQSFDRTKACFSVTAGPYTLLRDFDASLNAAADDDPGQPDILFREYCINLEDGHKQLNITFIPSKTAQHPYSYAFINGIEIVSMPPFLYYTNPHDYARVPQIVGTLSQYHIENSLALETIYRLNVAGNDITASRDTGMLRTWKVDDNYLTTQSAPSVDFGRITKLSFNMTQNYTAPDEVYRTVRNMGMGSMNMRFNLTWQLPVDSGFTYLLRLHFCQLDPQVRLAGDLMFFIYIEDQLVTNWADVLLWTYNQKGVPVVRDYVVSIPVNQKKPNLSLKLHPHPQSNIKDAQLNALELFKINESTGNLAGPNPDPPQQTPKAPVENSKKKSSCTTRTLAAVAGAVSGVVWVSLVVAFFLIKRKKNVAIDKCSNQNDGSSHGDGSSSLPTNLCRHFSIEEIRAATNNFDELFIVGTGGFGNVYKGYIEDSSTPVAIKRLKPGSRQGVDEFVTEIEMLSQLRHLNLVSLLGYCYESNEMILVYEFMDHGALRDHLYDTDNPSLSWKQRLHICIGVARGLNYLHTGVKHMIIHRDVKSTNILLDAKWAAKVSDFGLSRIGPTGISMTHVNTGVKGSIGYLDPEYYKRLRLTEKSDVYSFGVVLLEVLSGRQPLLHWEEKSEVYSFGVMLLEVLSGRHPLLHWEEKQRMSLANWAKHCYEKGTLSEIVDSELKGQIKPQCLNKFSEVALSCLLEDGTQRPSMKDIVGVLEFVLQFQDSAVNYEDSSSHSTVPLSDCSENTGSSTTSDGDRSNGRMESFVLIPDDVFSETKNPKGR* 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2217 894 Gene3D - 45 209 - -
Gso18g2217 894 Gene3D - 240 426 - -
Gso18g2217 894 MobiDBLite consensus disorder prediction 429 453 - -
Gso18g2217 894 CDD STKc_IRAK 536 829 - -
Gso18g2217 894 SMART serkin_6 530 831 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g2217 894 ProSitePatterns Serine/Threonine protein kinases active-site signature. 651 663 IPR008271 GO:0004672|GO:0006468
Gso18g2217 894 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 39 739 - -
Gso18g2217 894 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 738 861 - -
Gso18g2217 894 SUPERFAMILY Protein kinase-like (PK-like) 505 737 IPR011009 -
Gso18g2217 894 MobiDBLite consensus disorder prediction 845 894 - -
Gso18g2217 894 Gene3D Phosphorylase Kinase; domain 1 515 606 - -
Gso18g2217 894 Pfam Malectin-like domain 49 424 IPR024788 -
Gso18g2217 894 SUPERFAMILY Protein kinase-like (PK-like) 736 829 IPR011009 -
Gso18g2217 894 ProSitePatterns Protein kinases ATP-binding region signature. 536 559 IPR017441 GO:0005524
Gso18g2217 894 Gene3D Transferase(Phosphotransferase) domain 1 736 850 - -
Gso18g2217 894 Gene3D Transferase(Phosphotransferase) domain 1 607 735 - -
Gso18g2217 894 ProSiteProfiles Protein kinase domain profile. 530 831 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g2217 894 MobiDBLite consensus disorder prediction 845 871 - -
Gso18g2217 894 Pfam Protein tyrosine and serine/threonine kinase 536 734 IPR001245 GO:0004672|GO:0006468
Gso18g2217 894 Pfam Protein tyrosine and serine/threonine kinase 737 826 IPR001245 GO:0004672|GO:0006468
Gso18g2217 894 PANTHER OS07G0166700 PROTEIN 39 739 IPR045272 GO:0004714|GO:0006468
Gso18g2217 894 PANTHER OS07G0166700 PROTEIN 738 861 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2217 Gso-Chr18 55150452 55164514 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2217 36 894 Receptor kinase-like Gene Family AT3G51550 44.627 0.0 683
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gso18g2217 Malectin_like 1e-34 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2217 - - gmx:116423798 1517.67