Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2216 ATGGACACAACTTGCATACGATTTGCTTTAGGAGCCATCCTCCTCCACCTGCTGTTATTGTCCCTCCCTAACCTTTCCATAGCAGAGTTTATTTATAGTCCCCATGAGATCTTCAGCATCAACTGTGGCTCTAACAGTAGCTTGTCCACTCGCGATGGTCGCAATTGGACTGCAGACATCAAATTCCTCTCAGAAAACAAGGACTCAGTTGCTGCTCCTGCACTCACACCATCTACCCAAGAGGGTCCTTACACCGATGCTCGTTTCTCTCACTCCCAATTCACTTACTCCTTCCCTGTCTCCACAGGCCCAAAGTTTCTTCGCCTCTTCTTCTACTCAACTTCCTACCAAAACTTCCATCGCTCCAAAGCCTATTTCTCAGTCAAAGCAGGCCCATACACCCTCTTTCAAGACTTCAATGCTTCCCTCAATGCTGATGCTGATGATGACCCTGCCCAGACCGACATCTTGTTCAGAGAGTATTGCATCAACCTCAAAGATGGCGATCGGCTCAACATAACCTTCATTCCAAGCAAAACATCTCAGCATCCAGATTCGTACGCTTTCATCAATGGAATAGAGATTGTTTCAATGCCCCCTTTTCTCTACTACACCAATCCTGACGACGTCGACATCAGTGGATGGCCTCAACTCGTTGGCCTCAATACGAACCCGTTCCCCATTGAAAACAACTTTGCTCTGGAGACAAATTATCGGTTAAGAGTTGGAGACCAACAAATCCCGGCCTCACAGGACACGGGTATGCTCAGGAGCTGGGATGTGGATAACAAATATGTAACGACTCAAAGTGTACTATCTCTAGATATTGGCATTGGAATTAAGCTGACATTCACAAAGATTCCTAACTACACGGCACCAGACACAGTGTACCGATCCGTAAGGAATATGGGAAGTAATGGCACCATCAACATGGGGTTCAACCTCACATGGCAACTTCCCGTTGATTCAGGCTTCACCTACTTGCTAAGGTTACACTTTTGCCAGCTTGACCCGGATATGAAAAATCCTGGTTACCAGAGCTTCTTCATATTCGTTCAGGATCAGTTGGTTGAAAAGTGGGCAGACATTCTCGGTTGGAGCGATAAACAGGAGGGTGTCCCAGTGGTTAAACAGTATGTAGTTTTCATCCCAGGGAATCAGCAGGAAACGCTTAATCTTTCACTGAAAATGCATCCTAACCCTACAAGCTTGGCCAAGGACGCTCAAATAAACGCAATTGAACTCTTCAAAATCAACAACACAACAGGTAACCTCGCTGGACCTAACCCAGACTCTCATCCAAAGACCTCCGAGGTTCTTCTTCCGAGCTCAAACAAGAAAAGCAAAGGCAGCACGAGAACCCTAACTGCCGCCGTCGCAGGCACAGTTTCCGGTGTCGTTATGTTATCCCTTTCTGTTGCTTTCTTCCTCACCAAACGCAAGAAGAACATGGCCGTCGACGAAGGTTCCAATAAAAAAGGTGGAACTTCTCGAGGCGGTGGCTCATCGTCGCTACCAACCAACCTCTGCCGTAAGTTCTCAATCGCGGAAATCAGAGCCGCCACCAACAACTTCGACGAACTCTTCGTGGTTGGATTGGGAGGCTTCGGCAACGTGTACAAAGGATACATCGATGACGGTTCAACCCGAGTCGCAATCAAAAGGCTCAAAGCGGATTCTCGGCAGGGTGCGCAGGAGTTCATGAACGAGATCGAAATGCTGTCTCAACTTCGCCATCTCCATCTTGTCTCCCTCGTTGGTTACTGTTACGAGAGCAACGAAATGATACTGGTGTATGATTTCATGGATCGGGGTTCCCTCCGTGAGCATCTCTACGACACTGATAAGCCTTCCCTTTCATGGAAACAAAGGCTCCAGATATGCATAGGTGTCGGACGAGGACTGCATTATCTACATACGGGCACGAAGGATGTGATCATTCACCGTGATGTGAAGAGCGCCAATATCTTATTGGATGAAAAATGGGTGCCCAAGGTTTCGGACTTCGGGTTATCCCGAATTGGGCCCACAGGTATTTCTAGGACCCATGTGAACACTCAAGTGAAAGGTAGTATTGGATATTTAGACCCAGAGTATTACAAACGAGATCGTTTGACTGTGAAGTCTGATGTGTATTCCTTTGGAGTGGTGCTCTTGGAGGTATTATCTGGAAGGCAGCCTTTGCTCCATTGGGAGGAGAAACAACGAATGTCACTTGTTAAATGGGCAAAGCATTGCTATGAGAAGGGAATTCTGAGTGAGATTGTGGATCCAGAACTCAAGGGCCAGATAGTACCTCAGTGTTTGCGCAAATTTGGTGAGGTTGCACTGAGTTGTTTGCTTGAGGACGGGACTCAAAGGCCCTCCATGAAGGACATCGTTGGGATGCTGGAGTTGGTTTTGCAGCTTCAGGAAGGTGATGTTAATGGAGTGATGGAGAGTGGTGGGGATTATGAATATGGTGATGATGTGTTTAGCAGTAGCCATAATAGTGTCCATGTTTCGGATTATAGCAAAAGCACTGGGTTGAGCACGACAAGGGATGGAGATCGTAGCTATGGGAGTAATGATTTCGTGTTGATCCCGGATGATGTTTTCTCCGAGATTAAGGATCCAAATGGACGATGA 2628 0.4707 MDTTCIRFALGAILLHLLLLSLPNLSIAEFIYSPHEIFSINCGSNSSLSTRDGRNWTADIKFLSENKDSVAAPALTPSTQEGPYTDARFSHSQFTYSFPVSTGPKFLRLFFYSTSYQNFHRSKAYFSVKAGPYTLFQDFNASLNADADDDPAQTDILFREYCINLKDGDRLNITFIPSKTSQHPDSYAFINGIEIVSMPPFLYYTNPDDVDISGWPQLVGLNTNPFPIENNFALETNYRLRVGDQQIPASQDTGMLRSWDVDNKYVTTQSVLSLDIGIGIKLTFTKIPNYTAPDTVYRSVRNMGSNGTINMGFNLTWQLPVDSGFTYLLRLHFCQLDPDMKNPGYQSFFIFVQDQLVEKWADILGWSDKQEGVPVVKQYVVFIPGNQQETLNLSLKMHPNPTSLAKDAQINAIELFKINNTTGNLAGPNPDSHPKTSEVLLPSSNKKSKGSTRTLTAAVAGTVSGVVMLSLSVAFFLTKRKKNMAVDEGSNKKGGTSRGGGSSSLPTNLCRKFSIAEIRAATNNFDELFVVGLGGFGNVYKGYIDDGSTRVAIKRLKADSRQGAQEFMNEIEMLSQLRHLHLVSLVGYCYESNEMILVYDFMDRGSLREHLYDTDKPSLSWKQRLQICIGVGRGLHYLHTGTKDVIIHRDVKSANILLDEKWVPKVSDFGLSRIGPTGISRTHVNTQVKGSIGYLDPEYYKRDRLTVKSDVYSFGVVLLEVLSGRQPLLHWEEKQRMSLVKWAKHCYEKGILSEIVDPELKGQIVPQCLRKFGEVALSCLLEDGTQRPSMKDIVGMLELVLQLQEGDVNGVMESGGDYEYGDDVFSSSHNSVHVSDYSKSTGLSTTRDGDRSYGSNDFVLIPDDVFSEIKDPNGR* 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2216 875 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Gso18g2216 875 SUPERFAMILY Protein kinase-like (PK-like) 502 799 IPR011009 -
Gso18g2216 875 CDD STKc_IRAK 531 798 - -
Gso18g2216 875 Gene3D Phosphorylase Kinase; domain 1 492 601 - -
Gso18g2216 875 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 30 843 - -
Gso18g2216 875 ProSitePatterns Protein kinases ATP-binding region signature. 531 554 IPR017441 GO:0005524
Gso18g2216 875 Pfam Malectin-like domain 40 418 IPR024788 -
Gso18g2216 875 MobiDBLite consensus disorder prediction 424 451 - -
Gso18g2216 875 PANTHER OS07G0166700 PROTEIN 30 843 IPR045272 GO:0004714|GO:0006468
Gso18g2216 875 SMART serkin_6 525 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g2216 875 Pfam Protein tyrosine and serine/threonine kinase 531 796 IPR001245 GO:0004672|GO:0006468
Gso18g2216 875 ProSiteProfiles Protein kinase domain profile. 525 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g2216 875 Gene3D - 232 420 - -
Gso18g2216 875 Gene3D - 35 198 - -
Gso18g2216 875 Gene3D Transferase(Phosphotransferase) domain 1 602 814 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2216 Gso-Chr18 55128762 55131709 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2216 32 875 Receptor kinase-like Gene Family AT3G51550 45.871 0.0 698
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gso18g2216 Malectin_like 1.3e-35 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2216 - - gmx:113000103 1496.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2216 18 55128762 55131709 Gso8g2049 8 21771471 21774377 GST