Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso18g2215 | ATGTGTGCTGCTTCCATTGCATTAGCCATATCGATGGACACAACTCGCATACGAATTGCTTTAGGAACAATCCTCCTCATATTGCCGTGTCTCCCTTTCATTTCCATAGCAGAGGTTATTTATCCTCCCCTTGAGCTCTTCAGCATCAGCTGTGGATCATCCACCAACTTCACACTCGATGGTCGGAACTGGATTGGAGACAACAACAGTAAACTCCTCTCCAAAAGCCAGGGCTCAGTTGCTGCTCCTCCAAACACACCAACAACAATACAGGGCCCTTACACTTATGCTCGTCTCTCTCACTCCCAATTCACCTACTCCTCTCTCAAAGCAGGCCCAAAATTTGTTCGCCTCTTCTTCTACTCAGCTTCATACCAAAGCTTTTATCGCACCAAAGCCTATTTCTCAGTCACAGCTGGCCCATACACCCTCCTTCGAGATTTCGATGCTTCCCTCAATGCCGCTGCTGATGACGACCCCGGCCAGCTCGACATCTTGTTCAGAGAGTATTGCATCAACCTTGAAGATGGTCACAAGCAGCTCAACATAACGTTCATTCCAAGCAAAACAGCTCAACATCCAGATTCGTACGCTTTCATCAATGGAATCGAGATTGTTTCAATGCCCCCTTTTCTCTACTACACCAATCCTGACGACGTCGACATCACTGGATTGCCTCATCTCGTTGGCCTCAATACGAACCCGTTCCCCATTGAAAGCAACTATGCTATGGAGACAAAGTATCGGTTAAGAGTTGGAGACCAACAAATCCCGGCCTCACAGGACACGGGTATGCTCAGGAGCTGGGATGTGGATAACAAATATGTAACGACTCAAAGTATACAATCTCTAGATATTGGAACTGGAATTAAGCTGAGATTCACAAAGAAGACTCCTAACTACACTGCACCAGACACAGTGTACCGATCCGTAAGGAATATGGGAAGTAATGCCACCATCAACATGGGGTTCAACCTCACATGGCAACTTCCCGTTGATTCAGGCTTCACCTACTTGCTAAGGTTACACTTTTGCCAGCTTGACCCGGATATGAAAAATCCTGGTTACCAGAGCTTCTTCATTTTCGTTCAGGATCAGTTGGTTGAAGAGTGGGCAGACATTCTCGGTTGGAGCGATAAACAGGAGGGTGTCCCAGTGGTTAAACAGTATGTAGTTTTCATCCCAGGGAATCAGCAGGAAACGCTTAATCTTTCACTGAAAATGCATCCTAACCCTAAAAGCTTGGCCAAGGACGCTCAAATAAACGCAATTGAACTCTTCAAAATCAACGACACAACAGGTAACCTCGCTGGACCTAACCCAGACTCTCATCCAAAGACCTCCGAGGTTCCTCTTCCGAGCTCAAACAAGAAAAGCAAAGGCAGCACGAGAACCCTAACTGCCGCCGTCGCAGGCACAGTTTCCGGTGTCGTTATGTTATCCCTTTCTGTTGCTTTCTTCCTCACCAAACGCAAGAAGAACATGGCCGTCGACGAAGGTTCCAATAAAAAAGGTGGAACTTCTCGAGGCGGTGGCTCATCGTCGCTACCAACCAACCTCTGCCGTAAGTTCTCAATCGCGGAAATCAGAGCCGCCACCAACAACTTCGACGAACTCTTCGTGGTTGGATTGGGAGGCTTCGGCAACGTGTACAAAGGATACATCGATGACGGTTCAACCCGAGTCGCAATCAAAAGGCTCAAAGCGGATTCTCGGCAGGGTGCGCAGGAGTTCATGAACGAGATCGAAATGCTGTCTCAACTTCGCCATCTCCATCTTGTCTCCCTCGTTGGTTACTGTTACGAGAGCAACGAAATGATACTGGTGTATGATTTCATGGATCGGGGTTCCCTCCGTGAGCATCTCTACGACACTGATAAGCCTTCCCTTTCATGGAAACAAAGGCTCCAGATATGCATAGGTGTCGGACGAGGACTGCATTATCTACATACGGGCACGAAGGATGTGATCATTCACCGTGATGTGAAGAGCGCCAATATCTTATTGGATGAAAAATGGGTGCCCAAGGTTTCGGACTTCGGGTTATCCCGAATTGGGCCCACAGGTATTTCTAGGACCCATGTGAACACTCAAGTGAAAGGTAGTATTGGATATTTAGACCCAGAGTATTACAAACGAGATCGTTTGACTGTGAAGTCTGATGTGTATTCCTTTGGAGTGGTGCTCTTGGAGGTATTATCTGGAAGGCAGCCTTTGCTCCATTGGGAGGAGAAACAACGAATGTCACTTGTTAAATGGGCAAAGCATTGCTATGAGAAGGGAATTCTGAGTGAGATTGTGGATCCAGAACTCAAGGGCCAGATAGTACCTCAGTGTTTGCGCAAATTTGGTGAGGTTGCACTGAGTTGTTTGCTTGAGGACGGGACTCAAAGGCCCTCCATGAAGGACATCGTTGGGATGCTGGAGTTGGTTTTGCAGCTTCAGGAAGGTGATGTTAATGGAGTGATGGAGAGTGGTGGGGATTATGAATATGGTGATGATGTGTTTAGCAGTAGCCATAATAGTGTCCATGTTTCGGATTATAGCAAAAGCACTGGGTTGAGCACGACAAGGGATGGAGATCGTAGCTATGGGAGTAATGATTTCGTGTTGATCCCGGATGATGTTTTCTCCGAGATTAAGGATCCAAATGGATGA | 2658 | 0.4718 | MCAASIALAISMDTTRIRIALGTILLILPCLPFISIAEVIYPPLELFSISCGSSTNFTLDGRNWIGDNNSKLLSKSQGSVAAPPNTPTTIQGPYTYARLSHSQFTYSSLKAGPKFVRLFFYSASYQSFYRTKAYFSVTAGPYTLLRDFDASLNAAADDDPGQLDILFREYCINLEDGHKQLNITFIPSKTAQHPDSYAFINGIEIVSMPPFLYYTNPDDVDITGLPHLVGLNTNPFPIESNYAMETKYRLRVGDQQIPASQDTGMLRSWDVDNKYVTTQSIQSLDIGTGIKLRFTKKTPNYTAPDTVYRSVRNMGSNATINMGFNLTWQLPVDSGFTYLLRLHFCQLDPDMKNPGYQSFFIFVQDQLVEEWADILGWSDKQEGVPVVKQYVVFIPGNQQETLNLSLKMHPNPKSLAKDAQINAIELFKINDTTGNLAGPNPDSHPKTSEVPLPSSNKKSKGSTRTLTAAVAGTVSGVVMLSLSVAFFLTKRKKNMAVDEGSNKKGGTSRGGGSSSLPTNLCRKFSIAEIRAATNNFDELFVVGLGGFGNVYKGYIDDGSTRVAIKRLKADSRQGAQEFMNEIEMLSQLRHLHLVSLVGYCYESNEMILVYDFMDRGSLREHLYDTDKPSLSWKQRLQICIGVGRGLHYLHTGTKDVIIHRDVKSANILLDEKWVPKVSDFGLSRIGPTGISRTHVNTQVKGSIGYLDPEYYKRDRLTVKSDVYSFGVVLLEVLSGRQPLLHWEEKQRMSLVKWAKHCYEKGILSEIVDPELKGQIVPQCLRKFGEVALSCLLEDGTQRPSMKDIVGMLELVLQLQEGDVNGVMESGGDYEYGDDVFSSSHNSVHVSDYSKSTGLSTTRDGDRSYGSNDFVLIPDDVFSEIKDPNG* | 886 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso18g2215 | 885 | PANTHER | CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN | 39 | 854 | - | - | |
Gso18g2215 | 885 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 657 | 669 | IPR008271 | GO:0004672|GO:0006468 | |
Gso18g2215 | 885 | MobiDBLite | consensus disorder prediction | 434 | 464 | - | - | |
Gso18g2215 | 885 | Pfam | Malectin-like domain | 49 | 429 | IPR024788 | - | |
Gso18g2215 | 885 | PANTHER | OS07G0166700 PROTEIN | 39 | 854 | IPR045272 | GO:0004714|GO:0006468 | |
Gso18g2215 | 885 | ProSitePatterns | Protein kinases ATP-binding region signature. | 542 | 565 | IPR017441 | GO:0005524 | |
Gso18g2215 | 885 | Gene3D | Phosphorylase Kinase; domain 1 | 503 | 612 | - | - | |
Gso18g2215 | 885 | CDD | STKc_IRAK | 542 | 809 | - | - | |
Gso18g2215 | 885 | Gene3D | Transferase(Phosphotransferase) domain 1 | 613 | 825 | - | - | |
Gso18g2215 | 885 | ProSiteProfiles | Protein kinase domain profile. | 536 | 812 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso18g2215 | 885 | Gene3D | - | 45 | 208 | - | - | |
Gso18g2215 | 885 | Gene3D | - | 242 | 430 | - | - | |
Gso18g2215 | 885 | SUPERFAMILY | Protein kinase-like (PK-like) | 513 | 810 | IPR011009 | - | |
Gso18g2215 | 885 | Pfam | Protein tyrosine and serine/threonine kinase | 542 | 807 | IPR001245 | GO:0004672|GO:0006468 | |
Gso18g2215 | 885 | SMART | serkin_6 | 536 | 811 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso18g2215 | Gso-Chr18 | 55119866 | 55122868 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso18g2215 | 16 | 885 | Receptor kinase-like Gene Family | AT3G51550 | 44.578 | 0.0 | 679 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_CrRLK1L-1 | Gso18g2215 | Malectin_like | 3.8e-30 | CL0202 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso18g2215 | - | - | gmx:113000103 | 1632.85 |