Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2215 ATGTGTGCTGCTTCCATTGCATTAGCCATATCGATGGACACAACTCGCATACGAATTGCTTTAGGAACAATCCTCCTCATATTGCCGTGTCTCCCTTTCATTTCCATAGCAGAGGTTATTTATCCTCCCCTTGAGCTCTTCAGCATCAGCTGTGGATCATCCACCAACTTCACACTCGATGGTCGGAACTGGATTGGAGACAACAACAGTAAACTCCTCTCCAAAAGCCAGGGCTCAGTTGCTGCTCCTCCAAACACACCAACAACAATACAGGGCCCTTACACTTATGCTCGTCTCTCTCACTCCCAATTCACCTACTCCTCTCTCAAAGCAGGCCCAAAATTTGTTCGCCTCTTCTTCTACTCAGCTTCATACCAAAGCTTTTATCGCACCAAAGCCTATTTCTCAGTCACAGCTGGCCCATACACCCTCCTTCGAGATTTCGATGCTTCCCTCAATGCCGCTGCTGATGACGACCCCGGCCAGCTCGACATCTTGTTCAGAGAGTATTGCATCAACCTTGAAGATGGTCACAAGCAGCTCAACATAACGTTCATTCCAAGCAAAACAGCTCAACATCCAGATTCGTACGCTTTCATCAATGGAATCGAGATTGTTTCAATGCCCCCTTTTCTCTACTACACCAATCCTGACGACGTCGACATCACTGGATTGCCTCATCTCGTTGGCCTCAATACGAACCCGTTCCCCATTGAAAGCAACTATGCTATGGAGACAAAGTATCGGTTAAGAGTTGGAGACCAACAAATCCCGGCCTCACAGGACACGGGTATGCTCAGGAGCTGGGATGTGGATAACAAATATGTAACGACTCAAAGTATACAATCTCTAGATATTGGAACTGGAATTAAGCTGAGATTCACAAAGAAGACTCCTAACTACACTGCACCAGACACAGTGTACCGATCCGTAAGGAATATGGGAAGTAATGCCACCATCAACATGGGGTTCAACCTCACATGGCAACTTCCCGTTGATTCAGGCTTCACCTACTTGCTAAGGTTACACTTTTGCCAGCTTGACCCGGATATGAAAAATCCTGGTTACCAGAGCTTCTTCATTTTCGTTCAGGATCAGTTGGTTGAAGAGTGGGCAGACATTCTCGGTTGGAGCGATAAACAGGAGGGTGTCCCAGTGGTTAAACAGTATGTAGTTTTCATCCCAGGGAATCAGCAGGAAACGCTTAATCTTTCACTGAAAATGCATCCTAACCCTAAAAGCTTGGCCAAGGACGCTCAAATAAACGCAATTGAACTCTTCAAAATCAACGACACAACAGGTAACCTCGCTGGACCTAACCCAGACTCTCATCCAAAGACCTCCGAGGTTCCTCTTCCGAGCTCAAACAAGAAAAGCAAAGGCAGCACGAGAACCCTAACTGCCGCCGTCGCAGGCACAGTTTCCGGTGTCGTTATGTTATCCCTTTCTGTTGCTTTCTTCCTCACCAAACGCAAGAAGAACATGGCCGTCGACGAAGGTTCCAATAAAAAAGGTGGAACTTCTCGAGGCGGTGGCTCATCGTCGCTACCAACCAACCTCTGCCGTAAGTTCTCAATCGCGGAAATCAGAGCCGCCACCAACAACTTCGACGAACTCTTCGTGGTTGGATTGGGAGGCTTCGGCAACGTGTACAAAGGATACATCGATGACGGTTCAACCCGAGTCGCAATCAAAAGGCTCAAAGCGGATTCTCGGCAGGGTGCGCAGGAGTTCATGAACGAGATCGAAATGCTGTCTCAACTTCGCCATCTCCATCTTGTCTCCCTCGTTGGTTACTGTTACGAGAGCAACGAAATGATACTGGTGTATGATTTCATGGATCGGGGTTCCCTCCGTGAGCATCTCTACGACACTGATAAGCCTTCCCTTTCATGGAAACAAAGGCTCCAGATATGCATAGGTGTCGGACGAGGACTGCATTATCTACATACGGGCACGAAGGATGTGATCATTCACCGTGATGTGAAGAGCGCCAATATCTTATTGGATGAAAAATGGGTGCCCAAGGTTTCGGACTTCGGGTTATCCCGAATTGGGCCCACAGGTATTTCTAGGACCCATGTGAACACTCAAGTGAAAGGTAGTATTGGATATTTAGACCCAGAGTATTACAAACGAGATCGTTTGACTGTGAAGTCTGATGTGTATTCCTTTGGAGTGGTGCTCTTGGAGGTATTATCTGGAAGGCAGCCTTTGCTCCATTGGGAGGAGAAACAACGAATGTCACTTGTTAAATGGGCAAAGCATTGCTATGAGAAGGGAATTCTGAGTGAGATTGTGGATCCAGAACTCAAGGGCCAGATAGTACCTCAGTGTTTGCGCAAATTTGGTGAGGTTGCACTGAGTTGTTTGCTTGAGGACGGGACTCAAAGGCCCTCCATGAAGGACATCGTTGGGATGCTGGAGTTGGTTTTGCAGCTTCAGGAAGGTGATGTTAATGGAGTGATGGAGAGTGGTGGGGATTATGAATATGGTGATGATGTGTTTAGCAGTAGCCATAATAGTGTCCATGTTTCGGATTATAGCAAAAGCACTGGGTTGAGCACGACAAGGGATGGAGATCGTAGCTATGGGAGTAATGATTTCGTGTTGATCCCGGATGATGTTTTCTCCGAGATTAAGGATCCAAATGGATGA 2658 0.4718 MCAASIALAISMDTTRIRIALGTILLILPCLPFISIAEVIYPPLELFSISCGSSTNFTLDGRNWIGDNNSKLLSKSQGSVAAPPNTPTTIQGPYTYARLSHSQFTYSSLKAGPKFVRLFFYSASYQSFYRTKAYFSVTAGPYTLLRDFDASLNAAADDDPGQLDILFREYCINLEDGHKQLNITFIPSKTAQHPDSYAFINGIEIVSMPPFLYYTNPDDVDITGLPHLVGLNTNPFPIESNYAMETKYRLRVGDQQIPASQDTGMLRSWDVDNKYVTTQSIQSLDIGTGIKLRFTKKTPNYTAPDTVYRSVRNMGSNATINMGFNLTWQLPVDSGFTYLLRLHFCQLDPDMKNPGYQSFFIFVQDQLVEEWADILGWSDKQEGVPVVKQYVVFIPGNQQETLNLSLKMHPNPKSLAKDAQINAIELFKINDTTGNLAGPNPDSHPKTSEVPLPSSNKKSKGSTRTLTAAVAGTVSGVVMLSLSVAFFLTKRKKNMAVDEGSNKKGGTSRGGGSSSLPTNLCRKFSIAEIRAATNNFDELFVVGLGGFGNVYKGYIDDGSTRVAIKRLKADSRQGAQEFMNEIEMLSQLRHLHLVSLVGYCYESNEMILVYDFMDRGSLREHLYDTDKPSLSWKQRLQICIGVGRGLHYLHTGTKDVIIHRDVKSANILLDEKWVPKVSDFGLSRIGPTGISRTHVNTQVKGSIGYLDPEYYKRDRLTVKSDVYSFGVVLLEVLSGRQPLLHWEEKQRMSLVKWAKHCYEKGILSEIVDPELKGQIVPQCLRKFGEVALSCLLEDGTQRPSMKDIVGMLELVLQLQEGDVNGVMESGGDYEYGDDVFSSSHNSVHVSDYSKSTGLSTTRDGDRSYGSNDFVLIPDDVFSEIKDPNG* 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2215 885 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 39 854 - -
Gso18g2215 885 ProSitePatterns Serine/Threonine protein kinases active-site signature. 657 669 IPR008271 GO:0004672|GO:0006468
Gso18g2215 885 MobiDBLite consensus disorder prediction 434 464 - -
Gso18g2215 885 Pfam Malectin-like domain 49 429 IPR024788 -
Gso18g2215 885 PANTHER OS07G0166700 PROTEIN 39 854 IPR045272 GO:0004714|GO:0006468
Gso18g2215 885 ProSitePatterns Protein kinases ATP-binding region signature. 542 565 IPR017441 GO:0005524
Gso18g2215 885 Gene3D Phosphorylase Kinase; domain 1 503 612 - -
Gso18g2215 885 CDD STKc_IRAK 542 809 - -
Gso18g2215 885 Gene3D Transferase(Phosphotransferase) domain 1 613 825 - -
Gso18g2215 885 ProSiteProfiles Protein kinase domain profile. 536 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g2215 885 Gene3D - 45 208 - -
Gso18g2215 885 Gene3D - 242 430 - -
Gso18g2215 885 SUPERFAMILY Protein kinase-like (PK-like) 513 810 IPR011009 -
Gso18g2215 885 Pfam Protein tyrosine and serine/threonine kinase 542 807 IPR001245 GO:0004672|GO:0006468
Gso18g2215 885 SMART serkin_6 536 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2215 Gso-Chr18 55119866 55122868 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2215 16 885 Receptor kinase-like Gene Family AT3G51550 44.578 0.0 679
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gso18g2215 Malectin_like 3.8e-30 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2215 - - gmx:113000103 1632.85